Analysis of interatomic Contacts of Structural Units in PDB entry:
4WVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WVU entry

There are 3 chains in PDB entry 4WVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY -3LEU 231
B
VAL 2VAL 2
B
PHE 4PHE 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4WVU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
157 161Right-handed 310
Helix 2
AA2
A
162 169Right-handed alpha
Helix 3
AA3
A
174 178Right-handed 310
Helix 4
AA4
A
180 187Right-handed alpha
Helix 5
AA5
A
215 224Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4WVU.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 194first strand
Strand 2
A
197 200anti-parallel
Strand 3
A
206 207anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il