Analysis of interatomic Contacts of Structural Units in PDB entry:
4WXS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WXS entry

There is 1 chain in PDB entry 4WXS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 244SER 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 4WXS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
262 266Right-handed 310
Helix 2
AA2
A
303 310Right-handed alpha
Helix 3
AA3
A
424 426Right-handed 310
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There are 6 sheets in PDB entry 4WXS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
248 251first strand
Strand 2
A
499 501anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
255 259first strand
Strand 2
A
493 497anti-parallel
Strand 3
A
485 490anti-parallel
Strand 4
A
474 480anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
268 272first strand
Strand 2
A
285 289anti-parallel
Strand 3
A
295 301anti-parallel
Strand 4
A
314 322anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
328 330first strand
Strand 2
A
333 337anti-parallel
Strand 3
A
343 348anti-parallel
Strand 4
A
354 359anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
380 384first strand
Strand 2
A
387 392anti-parallel
Strand 3
A
400 406anti-parallel
Strand 4
A
413 422anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
428 432first strand
Strand 2
A
435 441anti-parallel
Strand 3
A
446 454anti-parallel
Strand 4
A
460 468anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il