Analysis of interatomic Contacts of Structural Units in PDB entry:
4XUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4XUE entry

There are 2 chains in PDB entry 4XUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
ALA 51PRO 265
A
GLY 52PRO 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4XUE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
54 67Right-handed alpha
Helix 2
AA2
B
71 86Right-handed alpha
Helix 3
AA3
B
92 108Right-handed alpha
Helix 4
AA4
B
120 128Right-handed alpha
Helix 5
AA5
B
142 157Right-handed alpha
Helix 6
AA6
B
158 160Right-handed 310
Helix 7
AA7
B
168 173Right-handed alpha
Helix 8
AA8
B
175 180Right-handed alpha
Helix 9
AA9
B
193 195Right-handed 310
Helix 10
AB1
B
196 207Right-handed alpha
Helix 11
AB2
B
226 236Right-handed alpha
Helix 12
AB3
A
54 67Right-handed alpha
Helix 13
AB4
A
71 86Right-handed alpha
Helix 14
AB5
A
92 108Right-handed alpha
Helix 15
AB6
A
120 128Right-handed alpha
Helix 16
AB7
A
142 157Right-handed alpha
Helix 17
AB8
A
158 160Right-handed 310
Helix 18
AB9
A
168 173Right-handed alpha
Helix 19
AC1
A
175 180Right-handed alpha
Helix 20
AC2
A
193 195Right-handed 310
Helix 21
AC3
A
196 207Right-handed alpha
Helix 22
AC4
A
226 235Right-handed alpha
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There are 2 sheets in PDB entry 4XUE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
162 166first strand
Strand 2
B
135 140parallel
Strand 3
B
111 115parallel
Strand 4
B
187 190parallel
Strand 5
B
215 218parallel
Strand 6
B
254 262anti-parallel
Strand 7
B
239 247anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
162 166first strand
Strand 2
A
135 140parallel
Strand 3
A
111 115parallel
Strand 4
A
187 190parallel
Strand 5
A
215 218parallel
Strand 6
A
254 262anti-parallel
Strand 7
A
239 247anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il