Analysis of interatomic Contacts of Structural Units in PDB entry:
4YJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4YJL entry

There are 12 chains in PDB entry 4YJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 400LYS 736
B
 HIS 401TYR 737
C
 HIS 400TYR 737
D
 HIS 400LYS 738
E
 HIS 400LYS 738
F
 HIS 400LYS 738
G
 PRO 496PHE 508
H
 PRO 496PHE 508
I
 PRO 496PHE 508
J
 PRO 496PHE 508
K
 PRO 496PHE 508
L
 PRO 496PHE 508
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are134 helices in PDB entry 4YJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
403 426Right-handed alpha
Helix 2
AA2
A
440 444Right-handed 310
Helix 3
AA3
A
445 458Right-handed alpha
Helix 4
AA4
A
459 469Right-handed alpha
Helix 5
AA5
A
470 487Right-handed alpha
Helix 6
AA6
A
491 510Right-handed alpha
Helix 7
AA7
A
512 522Right-handed alpha
Helix 8
AA8
A
522 532Right-handed alpha
Helix 9
AA9
A
533 535Right-handed 310
Helix 10
AB1
A
537 552Right-handed alpha
Helix 11
AB2
A
556 566Right-handed alpha
Helix 12
AB3
A
567 579Right-handed alpha
Helix 13
AB4
A
581 596Right-handed alpha
Helix 14
AB5
A
599 609Right-handed alpha
Helix 15
AB6
A
611 620Right-handed alpha
Helix 16
AB7
A
629 647Right-handed alpha
Helix 17
AB8
A
649 659Right-handed alpha
Helix 18
AB9
A
660 669Right-handed alpha
Helix 19
AC1
A
673 688Right-handed alpha
Helix 20
AC2
A
691 701Right-handed alpha
Helix 21
AC3
A
702 709Right-handed alpha
Helix 22
AC4
A
715 731Right-handed alpha
Helix 23
AC5
B
403 426Right-handed alpha
Helix 24
AC6
B
440 444Right-handed 310
Helix 25
AC7
B
445 458Right-handed alpha
Helix 26
AC8
B
459 469Right-handed alpha
Helix 27
AC9
B
470 487Right-handed alpha
Helix 28
AD1
B
491 510Right-handed alpha
Helix 29
AD2
B
512 522Right-handed alpha
Helix 30
AD3
B
522 532Right-handed alpha
Helix 31
AD4
B
533 535Right-handed 310
Helix 32
AD5
B
537 553Right-handed alpha
Helix 33
AD6
B
556 566Right-handed alpha
Helix 34
AD7
B
567 579Right-handed alpha
Helix 35
AD8
B
581 596Right-handed alpha
Helix 36
AD9
B
599 609Right-handed alpha
Helix 37
AE1
B
611 620Right-handed alpha
Helix 38
AE2
B
629 647Right-handed alpha
Helix 39
AE3
B
649 659Right-handed alpha
Helix 40
AE4
B
660 669Right-handed alpha
Helix 41
AE5
B
673 688Right-handed alpha
Helix 42
AE6
B
691 701Right-handed alpha
Helix 43
AE7
B
702 709Right-handed alpha
Helix 44
AE8
B
715 731Right-handed alpha
Helix 45
AE9
C
403 426Right-handed alpha
Helix 46
AF1
C
440 444Right-handed 310
Helix 47
AF2
C
445 457Right-handed alpha
Helix 48
AF3
C
459 469Right-handed alpha
Helix 49
AF4
C
470 487Right-handed alpha
Helix 50
AF5
C
491 510Right-handed alpha
Helix 51
AF6
C
512 522Right-handed alpha
Helix 52
AF7
C
522 532Right-handed alpha
Helix 53
AF8
C
533 535Right-handed 310
Helix 54
AF9
C
537 552Right-handed alpha
Helix 55
AG1
C
556 566Right-handed alpha
Helix 56
AG2
C
567 579Right-handed alpha
Helix 57
AG3
C
581 597Right-handed alpha
Helix 58
AG4
C
599 609Right-handed alpha
Helix 59
AG5
C
611 620Right-handed alpha
Helix 60
AG6
C
629 647Right-handed alpha
Helix 61
AG7
C
649 659Right-handed alpha
Helix 62
AG8
C
660 669Right-handed alpha
Helix 63
AG9
C
673 688Right-handed alpha
Helix 64
AH1
C
691 701Right-handed alpha
Helix 65
AH2
C
702 709Right-handed alpha
Helix 66
AH3
C
715 731Right-handed alpha
Helix 67
AH4
D
403 426Right-handed alpha
Helix 68
AH5
D
440 444Right-handed 310
Helix 69
AH6
D
445 457Right-handed alpha
Helix 70
AH7
D
459 469Right-handed alpha
Helix 71
AH8
D
470 487Right-handed alpha
Helix 72
AH9
D
491 510Right-handed alpha
Helix 73
AI1
D
512 522Right-handed alpha
Helix 74
AI2
D
522 532Right-handed alpha
Helix 75
AI3
D
533 535Right-handed 310
Helix 76
AI4
D
537 552Right-handed alpha
Helix 77
AI5
D
556 566Right-handed alpha
Helix 78
AI6
D
567 579Right-handed alpha
Helix 79
AI7
D
581 596Right-handed alpha
Helix 80
AI8
D
599 608Right-handed alpha
Helix 81
AI9
D
611 620Right-handed alpha
Helix 82
AJ1
D
629 647Right-handed alpha
Helix 83
AJ2
D
649 659Right-handed alpha
Helix 84
AJ3
D
660 669Right-handed alpha
Helix 85
AJ4
D
673 688Right-handed alpha
Helix 86
AJ5
D
691 701Right-handed alpha
Helix 87
AJ6
D
702 709Right-handed alpha
Helix 88
AJ7
D
715 731Right-handed alpha
Helix 89
AJ8
E
403 426Right-handed alpha
Helix 90
AJ9
E
440 444Right-handed 310
Helix 91
AK1
E
445 458Right-handed alpha
Helix 92
AK2
E
459 469Right-handed alpha
Helix 93
AK3
E
470 487Right-handed alpha
Helix 94
AK4
E
491 510Right-handed alpha
Helix 95
AK5
E
512 522Right-handed alpha
Helix 96
AK6
E
522 532Right-handed alpha
Helix 97
AK7
E
533 535Right-handed 310
Helix 98
AK8
E
537 553Right-handed alpha
Helix 99
AK9
E
556 566Right-handed alpha
Helix 100
AL1
E
567 579Right-handed alpha
Helix 101
AL2
E
581 596Right-handed alpha
Helix 102
AL3
E
599 609Right-handed alpha
Helix 103
AL4
E
611 620Right-handed alpha
Helix 104
AL5
E
629 647Right-handed alpha
Helix 105
AL6
E
649 659Right-handed alpha
Helix 106
AL7
E
660 669Right-handed alpha
Helix 107
AL8
E
673 688Right-handed alpha
Helix 108
AL9
E
691 701Right-handed alpha
Helix 109
AM1
E
702 709Right-handed alpha
Helix 110
AM2
E
715 731Right-handed alpha
Helix 111
AM3
F
403 426Right-handed alpha
Helix 112
AM4
F
440 444Right-handed 310
Helix 113
AM5
F
445 457Right-handed alpha
Helix 114
AM6
F
459 469Right-handed alpha
Helix 115
AM7
F
470 487Right-handed alpha
Helix 116
AM8
F
491 510Right-handed alpha
Helix 117
AM9
F
512 522Right-handed alpha
Helix 118
AN1
F
522 532Right-handed alpha
Helix 119
AN2
F
533 535Right-handed 310
Helix 120
AN3
F
537 552Right-handed alpha
Helix 121
AN4
F
556 566Right-handed alpha
Helix 122
AN5
F
567 579Right-handed alpha
Helix 123
AN6
F
581 596Right-handed alpha
Helix 124
AN7
F
599 608Right-handed alpha
Helix 125
AN8
F
611 620Right-handed alpha
Helix 126
AN9
F
629 647Right-handed alpha
Helix 127
AO1
F
649 659Right-handed alpha
Helix 128
AO2
F
660 669Right-handed alpha
Helix 129
AO3
F
673 688Right-handed alpha
Helix 130
AO4
F
691 701Right-handed alpha
Helix 131
AO5
F
702 709Right-handed alpha
Helix 132
AO6
F
715 731Right-handed alpha
Helix 133
AO7
F
732 733Right-handed 310
Helix 134
AO8
F
734 738Right-handed 310
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There are no sheets in PDB entry 4YJL
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