Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z07 entry

There are 3 chains in PDB entry 4Z07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 92TYR 351
C
 VAL 94TYR 351
E
 SER 92MET 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4Z07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
102 115Right-handed alpha
Helix 2
AA2
A
123 134Right-handed alpha
Helix 3
AA3
A
182 188Right-handed alpha
Helix 4
AA4
A
208 217Right-handed alpha
Helix 5
AA5
A
219 234Right-handed alpha
Helix 6
AA6
A
241 252Right-handed alpha
Helix 7
AA7
A
307 312Right-handed alpha
Helix 8
AA8
A
333 340Right-handed alpha
Helix 9
AA9
A
343 348Right-handed alpha
Helix 10
AB1
C
102 116Right-handed alpha
Helix 11
AB2
C
123 134Right-handed alpha
Helix 12
AB3
C
183 188Right-handed alpha
Helix 13
AB4
C
209 217Right-handed alpha
Helix 14
AB5
C
219 234Right-handed alpha
Helix 15
AB6
C
234 239Right-handed alpha
Helix 16
AB7
C
241 252Right-handed alpha
Helix 17
AB8
C
333 340Right-handed alpha
Helix 18
AB9
C
343 348Right-handed alpha
Helix 19
AC1
E
102 116Right-handed alpha
Helix 20
AC2
E
123 134Right-handed alpha
Helix 21
AC3
E
183 189Right-handed alpha
Helix 22
AC4
E
209 217Right-handed alpha
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There are 10 sheets in PDB entry 4Z07. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 139first strand
Strand 2
A
202 207anti-parallel
Strand 3
A
155 160anti-parallel
Strand 4
A
180 181anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
195 198anti-parallel
Strand 3
A
163 167anti-parallel
Strand 4
A
170 175anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 257first strand
Strand 2
A
326 332anti-parallel
Strand 3
A
272 278anti-parallel
Strand 4
A
304 305anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
319 322anti-parallel
Strand 3
A
281 285anti-parallel
Strand 4
A
294 299anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 139first strand
Strand 2
C
202 208anti-parallel
Strand 3
C
154 160anti-parallel
Strand 4
C
180 181anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 146first strand
Strand 2
C
195 198anti-parallel
Strand 3
C
163 167anti-parallel
Strand 4
C
170 175anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
253 257first strand
Strand 2
C
326 332anti-parallel
Strand 3
C
272 278anti-parallel
Strand 4
C
304 305anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 264first strand
Strand 2
C
319 322anti-parallel
Strand 3
C
281 285anti-parallel
Strand 4
C
294 299anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
135 139first strand
Strand 2
E
202 208anti-parallel
Strand 3
E
154 160anti-parallel
Strand 4
E
179 181anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 146first strand
Strand 2
E
195 198anti-parallel
Strand 3
E
163 167anti-parallel
Strand 4
E
170 175anti-parallel
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