Analysis of interatomic Contacts of Structural Units in PDB entry:
4Z4Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4Z4Q entry

There are 2 chains in PDB entry 4Z4Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 415ASP 1484
B
LYS 415ILE 1419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 4Z4Q. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
434 445Right-handed alpha
Helix 2
AA2
A
466 473Right-handed alpha
Helix 3
AA3
A
473 483Right-handed alpha
Helix 4
AA4
A
487 491Right-handed 310
Helix 5
AA5
A
492 496Right-handed 310
Helix 6
AA6
A
508 525Right-handed alpha
Helix 7
AA7
A
526 532Right-handed alpha
Helix 8
AA8
A
562 568Right-handed alpha
Helix 9
AA9
A
582 586Right-handed 310
Helix 10
AB1
A
587 596Right-handed alpha
Helix 11
AB2
A
610 623Right-handed alpha
Helix 12
AB3
A
625 637Right-handed alpha
Helix 13
AB4
A
1009 1027Right-handed alpha
Helix 14
AB5
A
1038 1051Right-handed alpha
Helix 15
AB6
A
1062 1073Right-handed alpha
Helix 16
AB7
A
1077 1088Right-handed alpha
Helix 17
AB8
A
1124 1131Right-handed alpha
Helix 18
AB9
A
1132 1137Right-handed 310
Helix 19
AC1
A
1160 1166Right-handed alpha
Helix 20
AC2
A
1182 1196Right-handed alpha
Helix 21
AC3
A
1200 1208Right-handed alpha
Helix 22
AC4
A
1221 1232Right-handed alpha
Helix 23
AC5
A
1264 1279Right-handed alpha
Helix 24
AC6
A
1307 1319Right-handed alpha
Helix 25
AC7
A
1341 1384Right-handed alpha
Helix 26
AC8
A
1384 1395Right-handed alpha
Helix 27
AC9
A
1397 1410Right-handed alpha
Helix 28
AD1
A
1412 1421Right-handed alpha
Helix 29
AD2
A
1422 1429Right-handed 310
Helix 30
AD3
A
1431 1455Right-handed alpha
Helix 31
AD4
A
1455 1475Right-handed alpha
Helix 32
AD5
B
434 445Right-handed alpha
Helix 33
AD6
B
466 472Right-handed alpha
Helix 34
AD7
B
473 481Right-handed alpha
Helix 35
AD8
B
487 491Right-handed 310
Helix 36
AD9
B
492 496Right-handed 310
Helix 37
AE1
B
508 526Right-handed alpha
Helix 38
AE2
B
526 532Right-handed alpha
Helix 39
AE3
B
549 553Right-handed 310
Helix 40
AE4
B
560 570Right-handed alpha
Helix 41
AE5
B
582 586Right-handed 310
Helix 42
AE6
B
587 596Right-handed alpha
Helix 43
AE7
B
610 623Right-handed alpha
Helix 44
AE8
B
625 637Right-handed alpha
Helix 45
AE9
B
1009 1027Right-handed alpha
Helix 46
AF1
B
1038 1051Right-handed alpha
Helix 47
AF2
B
1061 1073Right-handed alpha
Helix 48
AF3
B
1077 1088Right-handed alpha
Helix 49
AF4
B
1124 1131Right-handed alpha
Helix 50
AF5
B
1133 1137Right-handed 310
Helix 51
AF6
B
1160 1166Right-handed alpha
Helix 52
AF7
B
1182 1196Right-handed alpha
Helix 53
AF8
B
1200 1208Right-handed alpha
Helix 54
AF9
B
1221 1232Right-handed alpha
Helix 55
AG1
B
1264 1278Right-handed alpha
Helix 56
AG2
B
1307 1319Right-handed alpha
Helix 57
AG3
B
1341 1384Right-handed alpha
Helix 58
AG4
B
1384 1394Right-handed alpha
Helix 59
AG5
B
1397 1410Right-handed alpha
Helix 60
AG6
B
1412 1421Right-handed alpha
Helix 61
AG7
B
1422 1428Right-handed 310
Helix 62
AG8
B
1431 1454Right-handed alpha
Helix 63
AG9
B
1455 1475Right-handed alpha
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There are 15 sheets in PDB entry 4Z4Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
450 455first strand
Strand 2
A
428 433parallel
Strand 3
A
500 504parallel
Strand 4
A
535 538parallel
Strand 5
A
603 607anti-parallel
Strand 6
A
1004 1008parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1060 1061first strand
Strand 2
A
1120 1123anti-parallel
Strand 3
A
1099 1102anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1141 1143first strand
Strand 2
A
1150 1152anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1167 1170first strand
Strand 2
A
1175 1178anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1322 1328first strand
Strand 2
A
1233 1239anti-parallel
Strand 3
A
1218 1220anti-parallel
Strand 4
A
1481 1483parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1244 1247first strand
Strand 2
A
1251 1256anti-parallel
Strand 3
A
1298 1302anti-parallel
Strand 4
A
1284 1289anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1330 1333first strand
Strand 2
A
1336 1339anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
450 455first strand
Strand 2
B
428 433parallel
Strand 3
B
500 504parallel
Strand 4
B
535 538parallel
Strand 5
B
603 607anti-parallel
Strand 6
B
1005 1008parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
556 558first strand
Strand 2
B
543 545anti-parallel
Strand 3
B
577 579anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1099 1102first strand
Strand 2
B
1120 1123anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1141 1143first strand
Strand 2
B
1150 1152anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1167 1170first strand
Strand 2
B
1175 1178anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1322 1328first strand
Strand 2
B
1233 1239anti-parallel
Strand 3
B
1218 1220anti-parallel
Strand 4
B
1481 1483parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1241 1247first strand
Strand 2
B
1251 1258anti-parallel
Strand 3
B
1298 1302anti-parallel
Strand 4
B
1284 1289anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1330 1333first strand
Strand 2
B
1336 1339anti-parallel
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