Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4Z8E entry
There are 3 chains in PDB entry 4Z8E
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
ASN 16 | ARG 74 |
B
|
ASP 17 | ARG 74 |
C
|
GLY 20 | ARG 74 |
Back to top of page
There are 9
helices in PDB entry 4Z8E. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
AA1 | A
| 23 |
37 | Right-handed alpha |
Helix 2 |
AA2 | A
| 43 |
57 | Right-handed alpha |
Helix 3 |
AA3 | A
| 61 |
74 | Right-handed alpha |
Helix 4 |
AA4 | B
| 23 |
37 | Right-handed alpha |
Helix 5 |
AA5 | B
| 43 |
57 | Right-handed alpha |
Helix 6 |
AA6 | B
| 61 |
74 | Right-handed alpha |
Helix 7 |
AA7 | C
| 23 |
37 | Right-handed alpha |
Helix 8 |
AA8 | C
| 43 |
57 | Right-handed alpha |
Helix 9 |
AA9 | C
| 61 |
74 | Right-handed alpha |
Back to top of page
There are no sheets in PDB entry
4Z8E
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il