Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZG6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4ZG6 entry

There are 2 chains in PDB entry 4ZG6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 57	GLU 860
B	GLY 57	GLU 860

There are 77 helices in PDB entry 4ZG6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	89	95	Right-handed alpha
Helix 2	AA2	A	104	108	Right-handed 310
Helix 3	AA3	A	123	128	Right-handed alpha
Helix 4	AA4	A	133	140	Right-handed alpha
Helix 5	AA5	A	143	147	Right-handed 310
Helix 6	AA6	A	175	180	Right-handed 310
Helix 7	AA7	A	181	186	Right-handed alpha
Helix 8	AA8	A	186	196	Right-handed alpha
Helix 9	AA9	A	209	220	Right-handed alpha
Helix 10	AB1	A	222	227	Right-handed alpha
Helix 11	AB2	A	247	255	Right-handed 310
Helix 12	AB3	A	259	267	Right-handed alpha
Helix 13	AB4	A	281	293	Right-handed alpha
Helix 14	AB5	A	311	319	Right-handed alpha
Helix 15	AB6	A	322	324	Right-handed 310
Helix 16	AB7	A	325	346	Right-handed alpha
Helix 17	AB8	A	374	376	Right-handed 310
Helix 18	AB9	A	379	381	Right-handed 310
Helix 19	AC1	A	404	412	Right-handed alpha
Helix 20	AC2	A	427	429	Right-handed 310
Helix 21	AC3	A	430	434	Right-handed 310
Helix 22	AC4	A	481	485	Right-handed 310
Helix 23	AC5	A	508	517	Right-handed alpha
Helix 24	AC6	A	531	535	Right-handed 310
Helix 25	AC7	A	559	563	Right-handed 310
Helix 26	AC8	A	593	597	Right-handed alpha
Helix 27	AC9	A	660	664	Right-handed 310
Helix 28	AD1	A	666	673	Right-handed alpha
Helix 29	AD2	A	683	687	Right-handed 310
Helix 30	AD3	A	691	698	Right-handed 310
Helix 31	AD4	A	706	719	Right-handed alpha
Helix 32	AD5	A	719	728	Right-handed alpha
Helix 33	AD6	A	749	753	Right-handed 310
Helix 34	AD7	A	811	814	Right-handed 310
Helix 35	AD8	A	815	823	Right-handed alpha
Helix 36	AD9	A	826	835	Right-handed alpha
Helix 37	AE1	A	845	855	Right-handed alpha
Helix 38	AE2	B	79	84	Right-handed 310
Helix 39	AE3	B	89	95	Right-handed alpha
Helix 40	AE4	B	104	108	Right-handed 310
Helix 41	AE5	B	123	128	Right-handed alpha
Helix 42	AE6	B	133	140	Right-handed alpha
Helix 43	AE7	B	143	147	Right-handed 310
Helix 44	AE8	B	175	180	Right-handed 310
Helix 45	AE9	B	181	186	Right-handed alpha
Helix 46	AF1	B	186	196	Right-handed alpha
Helix 47	AF2	B	209	220	Right-handed alpha
Helix 48	AF3	B	222	227	Right-handed alpha
Helix 49	AF4	B	247	255	Right-handed 310
Helix 50	AF5	B	259	267	Right-handed alpha
Helix 51	AF6	B	281	294	Right-handed alpha
Helix 52	AF7	B	312	319	Right-handed alpha
Helix 53	AF8	B	322	324	Right-handed 310
Helix 54	AF9	B	325	346	Right-handed alpha
Helix 55	AG1	B	374	376	Right-handed 310
Helix 56	AG2	B	379	381	Right-handed 310
Helix 57	AG3	B	404	413	Right-handed alpha
Helix 58	AG4	B	427	429	Right-handed 310
Helix 59	AG5	B	430	434	Right-handed 310
Helix 60	AG6	B	481	485	Right-handed 310
Helix 61	AG7	B	508	517	Right-handed alpha
Helix 62	AG8	B	531	535	Right-handed 310
Helix 63	AG9	B	559	563	Right-handed 310
Helix 64	AH1	B	592	597	Right-handed alpha
Helix 65	AH2	B	660	664	Right-handed 310
Helix 66	AH3	B	667	673	Right-handed alpha
Helix 67	AH4	B	683	687	Right-handed 310
Helix 68	AH5	B	689	697	Right-handed alpha
Helix 69	AH6	B	698	700	Right-handed 310
Helix 70	AH7	B	706	719	Right-handed alpha
Helix 71	AH8	B	719	729	Right-handed alpha
Helix 72	AH9	B	749	753	Right-handed 310
Helix 73	AI1	B	781	785	Right-handed 310
Helix 74	AI2	B	811	814	Right-handed 310
Helix 75	AI3	B	815	823	Right-handed alpha
Helix 76	AI4	B	826	835	Right-handed alpha
Helix 77	AI5	B	845	855	Right-handed alpha

There are 18 sheets in PDB entry 4ZG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	308	first strand
Strand 2	A	166	171	parallel
Strand 3	A	353	358	parallel
Strand 4	A	488	491	anti-parallel
Strand 5	A	197	198	anti-parallel
Strand 6	A	499	500	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	203	first strand
Strand 2	A	504	505	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	235	first strand
Strand 2	A	240	242	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	364	first strand
Strand 2	A	473	474	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	372	first strand
Strand 2	A	453	455	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	386	first strand
Strand 2	A	390	395	anti-parallel
Strand 3	A	444	448	anti-parallel
Strand 4	A	421	425	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	604	first strand
Strand 2	A	836	837	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	610	613	first strand
Strand 2	A	619	623	anti-parallel
Strand 3	A	628	636	anti-parallel
Strand 4	A	731	738	anti-parallel
Strand 5	A	767	775	anti-parallel
Strand 6	A	789	797	anti-parallel
Strand 7	A	824	825	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	677	680	first strand
Strand 2	A	702	705	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	311	first strand
Strand 2	B	166	172	parallel
Strand 3	B	353	358	parallel
Strand 4	B	488	491	anti-parallel
Strand 5	B	197	198	anti-parallel
Strand 6	B	499	500	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	504	505	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	235	first strand
Strand 2	B	240	242	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	364	first strand
Strand 2	B	473	474	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	372	first strand
Strand 2	B	453	455	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	386	first strand
Strand 2	B	390	395	anti-parallel
Strand 3	B	444	448	anti-parallel
Strand 4	B	421	425	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	603	604	first strand
Strand 2	B	836	837	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	610	614	first strand
Strand 2	B	619	623	anti-parallel
Strand 3	B	629	636	anti-parallel
Strand 4	B	731	738	anti-parallel
Strand 5	B	767	775	anti-parallel
Strand 6	B	789	797	anti-parallel
Strand 7	B	824	825	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	677	680	first strand
Strand 2	B	702	705	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4ZG6

Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZG6