Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZGA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZGA entry

There is 1 chain in PDB entry 4ZGA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 57GLU 860
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 4ZGA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
80 84Right-handed 310
Helix 2
AA2
A
89 95Right-handed alpha
Helix 3
AA3
A
104 108Right-handed 310
Helix 4
AA4
A
123 128Right-handed alpha
Helix 5
AA5
A
133 140Right-handed alpha
Helix 6
AA6
A
143 147Right-handed 310
Helix 7
AA7
A
175 182Right-handed 310
Helix 8
AA8
A
186 196Right-handed alpha
Helix 9
AA9
A
209 220Right-handed alpha
Helix 10
AB1
A
222 227Right-handed alpha
Helix 11
AB2
A
247 255Right-handed 310
Helix 12
AB3
A
259 267Right-handed alpha
Helix 13
AB4
A
281 293Right-handed alpha
Helix 14
AB5
A
312 319Right-handed alpha
Helix 15
AB6
A
322 324Right-handed 310
Helix 16
AB7
A
325 346Right-handed alpha
Helix 17
AB8
A
374 376Right-handed 310
Helix 18
AB9
A
405 413Right-handed alpha
Helix 19
AC1
A
427 429Right-handed 310
Helix 20
AC2
A
430 434Right-handed 310
Helix 21
AC3
A
481 485Right-handed 310
Helix 22
AC4
A
508 516Right-handed alpha
Helix 23
AC5
A
531 535Right-handed 310
Helix 24
AC6
A
559 563Right-handed 310
Helix 25
AC7
A
593 597Right-handed alpha
Helix 26
AC8
A
660 664Right-handed 310
Helix 27
AC9
A
666 672Right-handed alpha
Helix 28
AD1
A
683 687Right-handed 310
Helix 29
AD2
A
689 697Right-handed alpha
Helix 30
AD3
A
698 700Right-handed 310
Helix 31
AD4
A
706 719Right-handed alpha
Helix 32
AD5
A
719 729Right-handed alpha
Helix 33
AD6
A
749 753Right-handed 310
Helix 34
AD7
A
811 814Right-handed 310
Helix 35
AD8
A
815 823Right-handed alpha
Helix 36
AD9
A
826 835Right-handed alpha
Helix 37
AE1
A
845 854Right-handed alpha
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There are 9 sheets in PDB entry 4ZGA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
303 311first strand
Strand 2
A
166 172parallel
Strand 3
A
353 358parallel
Strand 4
A
488 491anti-parallel
Strand 5
A
197 198anti-parallel
Strand 6
A
499 500parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
202 203first strand
Strand 2
A
504 505parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
233 234first strand
Strand 2
A
241 242anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
363 364first strand
Strand 2
A
473 474anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
370 372first strand
Strand 2
A
453 455parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
383 386first strand
Strand 2
A
391 395anti-parallel
Strand 3
A
444 448anti-parallel
Strand 4
A
421 425anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
603 604first strand
Strand 2
A
836 837anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
610 614first strand
Strand 2
A
619 623anti-parallel
Strand 3
A
628 636anti-parallel
Strand 4
A
731 738anti-parallel
Strand 5
A
767 775anti-parallel
Strand 6
A
789 797anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
677 680first strand
Strand 2
A
702 705anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il