Analysis of interatomic Contacts of Structural Units in PDB entry:
4ZVY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ZVY entry

There are 2 chains in PDB entry 4ZVY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3TYR 498
B
 THR 3SER 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4ZVY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 18Right-handed 310
Helix 2
AA2
A
56 75Right-handed alpha
Helix 3
AA3
A
78 96Right-handed alpha
Helix 4
AA4
A
96 108Right-handed alpha
Helix 5
AA5
A
111 133Right-handed alpha
Helix 6
AA6
A
170 183Right-handed alpha
Helix 7
AA7
A
192 194Right-handed 310
Helix 8
AA8
A
195 213Right-handed alpha
Helix 9
AA9
A
216 218Right-handed 310
Helix 10
AB1
A
226 236Right-handed alpha
Helix 11
AB2
A
247 261Right-handed alpha
Helix 12
AB3
A
282 296Right-handed alpha
Helix 13
AB4
A
297 300Right-handed 310
Helix 14
AB5
A
314 328Right-handed alpha
Helix 15
AB6
A
346 362Right-handed alpha
Helix 16
AB7
A
393 398Right-handed alpha
Helix 17
AB8
A
412 422Right-handed alpha
Helix 18
AB9
A
435 444Right-handed alpha
Helix 19
AC1
A
483 487Right-handed 310
Helix 20
AC2
B
4 18Right-handed 310
Helix 21
AC3
B
56 75Right-handed alpha
Helix 22
AC4
B
78 96Right-handed alpha
Helix 23
AC5
B
96 108Right-handed alpha
Helix 24
AC6
B
111 133Right-handed alpha
Helix 25
AC7
B
134 136Right-handed 310
Helix 26
AC8
B
170 183Right-handed alpha
Helix 27
AC9
B
192 194Right-handed 310
Helix 28
AD1
B
195 213Right-handed alpha
Helix 29
AD2
B
216 218Right-handed 310
Helix 30
AD3
B
226 236Right-handed alpha
Helix 31
AD4
B
247 261Right-handed alpha
Helix 32
AD5
B
282 296Right-handed alpha
Helix 33
AD6
B
297 300Right-handed 310
Helix 34
AD7
B
314 328Right-handed alpha
Helix 35
AD8
B
346 363Right-handed alpha
Helix 36
AD9
B
393 398Right-handed alpha
Helix 37
AE1
B
412 421Right-handed alpha
Helix 38
AE2
B
435 444Right-handed alpha
Helix 39
AE3
B
483 487Right-handed 310
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There are 6 sheets in PDB entry 4ZVY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
48 53parallel
Strand 3
A
37 41anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
26 27anti-parallel
Strand 3
A
220 223anti-parallel
Strand 4
A
186 190parallel
Strand 5
A
159 163parallel
Strand 6
A
241 245parallel
Strand 7
A
264 268parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
148 156anti-parallel
Strand 3
A
489 497anti-parallel
Strand 4
B
452 455parallel
Strand 5
B
428 432parallel
Strand 6
B
273 277parallel
Strand 7
B
307 311parallel
Strand 8
B
404 410parallel
Strand 9
B
384 387parallel
Strand 10
B
366 369anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 369first strand
Strand 2
A
384 387anti-parallel
Strand 3
A
404 410parallel
Strand 4
A
307 311parallel
Strand 5
A
273 277parallel
Strand 6
A
428 432parallel
Strand 7
A
452 455parallel
Strand 8
B
489 497parallel
Strand 9
B
148 156anti-parallel
Strand 10
B
140 142anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
48 53parallel
Strand 3
B
37 41anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
26 27anti-parallel
Strand 3
B
220 223anti-parallel
Strand 4
B
186 190parallel
Strand 5
B
159 163parallel
Strand 6
B
241 245parallel
Strand 7
B
264 268parallel
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