Analysis of interatomic Contacts of Structural Units in PDB entry:
5ABB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ABB entry

There are 3 chains in PDB entry 5ABB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 443
B
 ARG 12PHE 127
Z
 GLY 19ARG 87
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5ABB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 37Right-handed alpha
Helix 2
2
A
46 55Right-handed alpha
Helix 3
3
A
65 69Right-handed 310
Helix 4
4
A
82 99Right-handed alpha
Helix 5
5
A
99 109Right-handed alpha
Helix 6
6
A
109 139Right-handed alpha
Helix 7
7
A
153 181Right-handed alpha
Helix 8
8
A
185 197Right-handed alpha
Helix 9
9
A
198 211Right-handed alpha
Helix 10
10
A
218 241Right-handed alpha
Helix 11
11
A
273 294Right-handed alpha
Helix 12
12
A
314 335Right-handed alpha
Helix 13
13
A
360 394Right-handed alpha
Helix 14
14
A
398 402Right-handed 310
Helix 15
15
A
403 425Right-handed alpha
Helix 16
16
B
12 16Right-handed 310
Helix 17
17
B
18 23Right-handed alpha
Helix 18
18
B
23 32Right-handed alpha
Helix 19
19
B
42 48Right-handed alpha
Helix 20
20
B
49 60Right-handed alpha
Helix 21
21
B
75 84Right-handed alpha
Helix 22
22
B
90 99Right-handed alpha
Helix 23
23
B
100 111Right-handed alpha
Helix 24
24
B
114 121Right-handed alpha
Helix 25
25
Z
23 49Right-handed alpha
Helix 26
26
Z
64 84Right-handed alpha
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There are no sheets in PDB entry 5ABB
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il