Analysis of interatomic Contacts of Structural Units in PDB entry:
5AC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AC2 entry

There is 1 chain in PDB entry 5AC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8SER 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5AC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 71Right-handed alpha
Helix 2
2
A
75 80Right-handed alpha
Helix 3
3
A
81 99Right-handed alpha
Helix 4
4
A
99 112Right-handed alpha
Helix 5
5
A
114 121Right-handed alpha
Helix 6
6
A
121 137Right-handed alpha
Helix 7
7
A
138 140Right-handed 310
Helix 8
8
A
171 186Right-handed alpha
Helix 9
9
A
199 213Right-handed alpha
Helix 10
10
A
228 236Right-handed alpha
Helix 11
11
A
247 261Right-handed alpha
Helix 12
12
A
283 301Right-handed alpha
Helix 13
13
A
313 328Right-handed alpha
Helix 14
14
A
347 364Right-handed alpha
Helix 15
15
A
394 399Right-handed alpha
Helix 16
16
A
413 423Right-handed alpha
Helix 17
17
A
436 447Right-handed alpha
Helix 18
18
A
469 471Right-handed 310
Helix 19
19
A
478 484Right-handed alpha
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There are 6 sheets in PDB entry 5AC2. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
28 30anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
48 53anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
151 159anti-parallel
Strand 3
A
487 495anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
189 193parallel
Strand 3
A
162 166parallel
Strand 4
A
241 245parallel
Strand 5
A
265 269parallel
Strand 6
A
473 474anti-parallel
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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 370first strand
Strand 2
A
385 388anti-parallel
Strand 3
A
405 411parallel
Strand 4
A
306 312parallel
Strand 5
A
274 278parallel
Strand 6
A
429 433parallel
Strand 7
A
451 454parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 375first strand
Strand 2
A
381 382anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il