Analysis of interatomic Contacts of Structural Units in PDB entry:
5ANL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ANL entry

There is 1 chain in PDB entry 5ANL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 286ALA 869
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5ANL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
289 301Right-handed alpha
Helix 2
2
A
309 319Right-handed alpha
Helix 3
3
A
319 324Right-handed alpha
Helix 4
4
A
325 328Right-handed 310
Helix 5
5
A
329 336Right-handed alpha
Helix 6
6
A
341 353Right-handed alpha
Helix 7
7
A
359 367Right-handed alpha
Helix 8
8
A
373 385Right-handed alpha
Helix 9
9
A
388 403Right-handed alpha
Helix 10
10
A
404 406Right-handed 310
Helix 11
11
A
407 413Right-handed alpha
Helix 12
12
A
441 445Right-handed 310
Helix 13
13
A
474 485Right-handed alpha
Helix 14
14
A
486 503Right-handed alpha
Helix 15
15
A
503 510Right-handed alpha
Helix 16
16
A
510 530Right-handed alpha
Helix 17
17
A
532 562Right-handed alpha
Helix 18
18
A
565 579Right-handed alpha
Helix 19
19
A
641 661Right-handed alpha
Helix 20
20
A
690 698Right-handed alpha
Helix 21
21
A
699 708Right-handed alpha
Helix 22
22
A
713 716Right-handed 310
Helix 23
23
A
718 739Right-handed alpha
Helix 24
24
A
780 787Right-handed alpha
Helix 25
25
A
792 811Right-handed alpha
Helix 26
26
A
812 822Right-handed alpha
Helix 27
27
A
828 833Right-handed alpha
Helix 28
28
A
834 836Right-handed 310
Helix 29
29
A
837 846Right-handed alpha
Helix 30
30
A
851 869Right-handed alpha
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There are 3 sheets in PDB entry 5ANL. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
591 593first strand
Strand 2
A
596 604anti-parallel
Strand 3
A
619 625anti-parallel
Strand 4
A
630 637anti-parallel
Strand 5
A
679 683anti-parallel
Strand 6
A
672 674anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
591 593first strand
Strand 2
A
596 604anti-parallel
Strand 3
A
619 625anti-parallel
Strand 4
A
610 611parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
688 689first strand
Strand 2
A
749 751anti-parallel
Strand 3
A
757 759anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il