Analysis of interatomic Contacts of Structural Units in PDB entry:
5AO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AO0 entry

There are 2 chains in PDB entry 5AO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 110GLN 582
B
 ASP 113ASP 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 5AO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
129 137Right-handed alpha
Helix 2
2
A
138 143Right-handed alpha
Helix 3
3
A
144 147Right-handed 310
Helix 4
4
A
150 156Right-handed 310
Helix 5
5
A
163 186Right-handed alpha
Helix 6
6
A
187 190Right-handed 310
Helix 7
7
A
192 206Right-handed alpha
Helix 8
8
A
214 220Right-handed alpha
Helix 9
9
A
220 226Right-handed alpha
Helix 10
10
A
232 248Right-handed alpha
Helix 11
11
A
249 257Right-handed alpha
Helix 12
12
A
260 274Right-handed alpha
Helix 13
13
A
291 300Right-handed 310
Helix 14
14
A
309 324Right-handed alpha
Helix 15
15
A
330 338Right-handed alpha
Helix 16
16
A
355 373Right-handed alpha
Helix 17
17
A
376 394Right-handed alpha
Helix 18
18
A
395 397Right-handed 310
Helix 19
19
A
402 404Right-handed 310
Helix 20
20
A
411 414Right-handed 310
Helix 21
21
A
415 421Right-handed alpha
Helix 22
22
A
424 433Right-handed alpha
Helix 23
23
A
435 437Right-handed 310
Helix 24
24
A
438 450Right-handed alpha
Helix 25
25
A
469 473Right-handed 310
Helix 26
26
A
475 482Right-handed alpha
Helix 27
27
A
494 496Right-handed 310
Helix 28
28
A
558 576Right-handed alpha
Helix 29
29
B
129 137Right-handed alpha
Helix 30
30
B
138 143Right-handed alpha
Helix 31
31
B
144 147Right-handed 310
Helix 32
32
B
150 156Right-handed 310
Helix 33
33
B
163 186Right-handed alpha
Helix 34
34
B
187 190Right-handed 310
Helix 35
35
B
192 206Right-handed alpha
Helix 36
36
B
214 220Right-handed alpha
Helix 37
37
B
220 226Right-handed alpha
Helix 38
38
B
232 248Right-handed alpha
Helix 39
39
B
249 257Right-handed alpha
Helix 40
40
B
260 274Right-handed alpha
Helix 41
41
B
291 300Right-handed 310
Helix 42
42
B
309 324Right-handed alpha
Helix 43
43
B
330 337Right-handed alpha
Helix 44
44
B
355 373Right-handed alpha
Helix 45
45
B
376 395Right-handed alpha
Helix 46
46
B
402 404Right-handed 310
Helix 47
47
B
411 414Right-handed 310
Helix 48
48
B
415 421Right-handed alpha
Helix 49
49
B
424 433Right-handed alpha
Helix 50
50
B
435 437Right-handed 310
Helix 51
51
B
438 450Right-handed alpha
Helix 52
52
B
469 473Right-handed 310
Helix 53
53
B
475 482Right-handed alpha
Helix 54
54
B
494 496Right-handed 310
Helix 55
55
B
558 576Right-handed alpha
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There are 8 sheets in PDB entry 5AO0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
124 128anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 343first strand
Strand 2
A
346 352anti-parallel
Strand 3
A
519 522parallel
Strand 4
A
525 530anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 400first strand
Strand 2
A
406 407anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 460first strand
Strand 2
A
548 554anti-parallel
Strand 3
A
498 504anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
124 128anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 343first strand
Strand 2
B
346 352anti-parallel
Strand 3
B
520 521parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
399 400first strand
Strand 2
B
406 407anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 460first strand
Strand 2
B
549 554anti-parallel
Strand 3
B
498 503anti-parallel
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