Analysis of interatomic Contacts of Structural Units in PDB entry:
5AYM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5AYM entry

There is 1 chain in PDB entry 5AYM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7ARG 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5AYM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 39Right-handed alpha
Helix 2
AA2
A
42 69Right-handed alpha
Helix 3
AA3
A
72 104Right-handed alpha
Helix 4
AA4
A
109 140Right-handed alpha
Helix 5
AA5
A
141 146Right-handed alpha
Helix 6
AA6
A
147 149Right-handed 310
Helix 7
AA7
A
150 177Right-handed alpha
Helix 8
AA8
A
186 213Right-handed alpha
Helix 9
AA9
A
214 218Right-handed 310
Helix 10
AB1
A
243 252Right-handed alpha
Helix 11
AB2
A
253 255Right-handed 310
Helix 12
AB3
A
262 272Right-handed alpha
Helix 13
AB4
A
276 286Right-handed alpha
Helix 14
AB5
A
286 306Right-handed alpha
Helix 15
AB6
A
306 330Right-handed alpha
Helix 16
AB7
A
336 366Right-handed alpha
Helix 17
AB8
A
367 369Right-handed 310
Helix 18
AB9
A
370 396Right-handed alpha
Helix 19
AC1
A
401 424Right-handed alpha
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There are no sheets in PDB entry 5AYM
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