Analysis of interatomic Contacts of Structural Units in PDB entry:
5B2G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5B2G entry

There are 6 chains in PDB entry 5B2G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 1002SER 1347
B
ALA 203PHE 319
C
GLY 998SER 184
D
GLU 196PHE 319
E
ASN 1002SER 1347
F
ILE 199LEU 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 5B2G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1002 1012Right-handed alpha
Helix 2
AA2
A
1038 1050Right-handed alpha
Helix 3
AA3
A
1059 1081Right-handed alpha
Helix 4
AA4
A
1084 1089Right-handed alpha
Helix 5
AA5
A
1092 1106Right-handed alpha
Helix 6
AA6
A
1107 1112Right-handed alpha
Helix 7
AA7
A
1114 1123Right-handed alpha
Helix 8
AA8
A
1125 1134Right-handed alpha
Helix 9
AA9
A
1136 1142Right-handed alpha
Helix 10
AB1
A
1142 1155Right-handed alpha
Helix 11
AB2
A
1169 1190Right-handed alpha
Helix 12
AB3
A
1237 1260Right-handed alpha
Helix 13
AB4
A
1279 1312Right-handed alpha
Helix 14
AB5
A
1325 1346Right-handed alpha
Helix 15
AB6
B
211 216Right-handed alpha
Helix 16
AB7
C
1002 1012Right-handed alpha
Helix 17
AB8
C
1038 1051Right-handed alpha
Helix 18
AB9
C
1059 1081Right-handed alpha
Helix 19
AC1
C
1084 1090Right-handed alpha
Helix 20
AC2
C
1092 1106Right-handed alpha
Helix 21
AC3
C
1107 1113Right-handed alpha
Helix 22
AC4
C
1114 1123Right-handed alpha
Helix 23
AC5
C
1125 1134Right-handed alpha
Helix 24
AC6
C
1136 1142Right-handed alpha
Helix 25
AC7
C
1142 1156Right-handed alpha
Helix 26
AC8
C
6 27Right-handed alpha
Helix 27
AC9
C
74 97Right-handed alpha
Helix 28
AD1
C
116 149Right-handed alpha
Helix 29
AD2
C
162 183Right-handed alpha
Helix 30
AD3
D
198 203Right-handed alpha
Helix 31
AD4
D
211 216Right-handed alpha
Helix 32
AD5
E
1003 1012Right-handed alpha
Helix 33
AD6
E
1038 1050Right-handed alpha
Helix 34
AD7
E
1059 1080Right-handed alpha
Helix 35
AD8
E
1084 1089Right-handed alpha
Helix 36
AD9
E
1092 1106Right-handed alpha
Helix 37
AE1
E
1107 1113Right-handed alpha
Helix 38
AE2
E
1114 1123Right-handed alpha
Helix 39
AE3
E
1125 1134Right-handed alpha
Helix 40
AE4
E
1136 1142Right-handed alpha
Helix 41
AE5
E
1142 1156Right-handed alpha
Helix 42
AE6
E
1165 1190Right-handed alpha
Helix 43
AE7
E
1237 1260Right-handed alpha
Helix 44
AE8
E
1279 1312Right-handed alpha
Helix 45
AE9
E
1325 1346Right-handed alpha
Helix 46
AF1
F
211 216Right-handed alpha
Helix 47
AF2
G
1002 1012Right-handed alpha
Helix 48
AF3
G
1038 1050Right-handed alpha
Helix 49
AF4
G
1059 1080Right-handed alpha
Helix 50
AF5
G
1084 1090Right-handed alpha
Helix 51
AF6
G
1092 1106Right-handed alpha
Helix 52
AF7
G
1107 1112Right-handed alpha
Helix 53
AF8
G
1114 1123Right-handed alpha
Helix 54
AF9
G
1125 1134Right-handed alpha
Helix 55
AG1
G
1136 1142Right-handed alpha
Helix 56
AG2
G
1142 1156Right-handed alpha
Helix 57
AG3
G
1170 1190Right-handed alpha
Helix 58
AG4
G
1237 1260Right-handed alpha
Helix 59
AG5
G
1279 1312Right-handed alpha
Helix 60
AG6
G
1325 1346Right-handed alpha
Helix 61
AG7
H
198 203Right-handed alpha
Helix 62
AG8
H
211 216Right-handed alpha
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There are 16 sheets in PDB entry 5B2G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1018 1019first strand
Strand 2
A
1025 1027anti-parallel
Strand 3
A
1031 1034anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1226 1229first strand
Strand 2
A
1215 1220anti-parallel
Strand 3
A
1207 1211anti-parallel
Strand 4
A
1194 1198anti-parallel
Strand 5
A
1319 1323anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
205 210first strand
Strand 2
B
238 244parallel
Strand 3
B
294 302anti-parallel
Strand 4
B
259 266anti-parallel
Strand 5
B
271 277anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
223 227first strand
Strand 2
B
313 318anti-parallel
Strand 3
B
249 255anti-parallel
Strand 4
B
285 291anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1014 1019first strand
Strand 2
C
1025 1028anti-parallel
Strand 3
C
1031 1034anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
63 66first strand
Strand 2
C
52 57anti-parallel
Strand 3
C
44 48anti-parallel
Strand 4
C
31 35anti-parallel
Strand 5
C
159 160anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
205 210first strand
Strand 2
D
238 244parallel
Strand 3
D
294 302anti-parallel
Strand 4
D
259 266anti-parallel
Strand 5
D
271 277anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
223 227first strand
Strand 2
D
313 318anti-parallel
Strand 3
D
249 255anti-parallel
Strand 4
D
285 291anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1018 1019first strand
Strand 2
E
1025 1027anti-parallel
Strand 3
E
1031 1034anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1226 1229first strand
Strand 2
E
1215 1220anti-parallel
Strand 3
E
1207 1211anti-parallel
Strand 4
E
1194 1198anti-parallel
Strand 5
E
1320 1323anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
205 210first strand
Strand 2
F
238 244parallel
Strand 3
F
294 302anti-parallel
Strand 4
F
259 266anti-parallel
Strand 5
F
271 277anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
223 227first strand
Strand 2
F
313 318anti-parallel
Strand 3
F
249 255anti-parallel
Strand 4
F
285 291anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
1014 1019first strand
Strand 2
G
1025 1028anti-parallel
Strand 3
G
1031 1034anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
1226 1229first strand
Strand 2
G
1215 1220anti-parallel
Strand 3
G
1207 1211anti-parallel
Strand 4
G
1194 1198anti-parallel
Strand 5
G
1322 1323anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
205 210first strand
Strand 2
H
238 244parallel
Strand 3
H
294 302anti-parallel
Strand 4
H
259 266anti-parallel
Strand 5
H
271 277anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
223 227first strand
Strand 2
H
313 318anti-parallel
Strand 3
H
249 255anti-parallel
Strand 4
H
285 291anti-parallel
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