Analysis of interatomic Contacts of Structural Units in PDB entry:
5C8H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5C8H entry

There is 1 chain in PDB entry 5C8H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 471GLU 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5C8H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
473 482Right-handed alpha
Helix 2
AA2
A
485 502Right-handed alpha
Helix 3
AA3
A
513 523Right-handed alpha
Helix 4
AA4
A
528 542Right-handed alpha
Helix 5
AA5
A
562 573Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5C8H.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 512first strand
Strand 2
A
555 558anti-parallel
Strand 3
A
546 549anti-parallel
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