Analysis of interatomic Contacts of Structural Units in PDB entry:
5CL9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5CL9 entry

There are 4 chains in PDB entry 5CL9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL -1ASN 229
B
 C 1 A 5
B
 A 7 G 12
C
 C 13 G 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 5CL9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
17 28Right-handed alpha
Helix 3
AA3
A
38 54Right-handed alpha
Helix 4
AA4
A
57 59Right-handed 310
Helix 5
AA5
A
60 70Right-handed alpha
Helix 6
AA6
A
73 87Right-handed alpha
Helix 7
AA7
A
88 91Right-handed 310
Helix 8
AA8
A
92 94Right-handed 310
Helix 9
AA9
A
95 104Right-handed alpha
Helix 10
AB1
A
108 116Right-handed alpha
Helix 11
AB2
A
118 127Right-handed alpha
Helix 12
AB3
A
128 133Right-handed 310
Helix 13
AB4
A
134 141Right-handed alpha
Helix 14
AB5
A
143 153Right-handed alpha
Helix 15
AB6
A
157 161Right-handed 310
Helix 16
AB7
A
162 174Right-handed alpha
Helix 17
AB8
A
178 193Right-handed alpha
Helix 18
AB9
A
196 207Right-handed alpha
Helix 19
AC1
A
210 218Right-handed alpha
Helix 20
AC2
A
221 226Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5CL9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il