Analysis of interatomic Contacts of Structural Units in PDB entry:
5DQQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5DQQ entry

There is 1 chain in PDB entry 5DQQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 30GLY 703
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5DQQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 47Right-handed alpha
Helix 2
AA2
A
61 72Right-handed alpha
Helix 3
AA3
A
72 92Right-handed alpha
Helix 4
AA4
A
116 137Right-handed alpha
Helix 5
AA5
A
138 142Right-handed 310
Helix 6
AA6
A
143 150Right-handed alpha
Helix 7
AA7
A
150 173Right-handed alpha
Helix 8
AA8
A
188 197Right-handed alpha
Helix 9
AA9
A
199 238Right-handed alpha
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
250 263Right-handed alpha
Helix 12
AB3
A
266 271Right-handed alpha
Helix 13
AB4
A
271 278Right-handed alpha
Helix 14
AB5
A
280 295Right-handed alpha
Helix 15
AB6
A
295 335Right-handed alpha
Helix 16
AB7
A
344 358Right-handed alpha
Helix 17
AB8
A
366 377Right-handed alpha
Helix 18
AB9
A
385 398Right-handed alpha
Helix 19
AC1
A
417 428Right-handed alpha
Helix 20
AC2
A
429 457Right-handed alpha
Helix 21
AC3
A
460 487Right-handed alpha
Helix 22
AC4
A
487 494Right-handed alpha
Helix 23
AC5
A
494 517Right-handed alpha
Helix 24
AC6
A
525 533Right-handed alpha
Helix 25
AC7
A
534 548Right-handed 310
Helix 26
AC8
A
549 550Right-handed 310
Helix 27
AC9
A
551 587Right-handed alpha
Helix 28
AD1
A
595 603Right-handed alpha
Helix 29
AD2
A
604 610Right-handed alpha
Helix 30
AD3
A
615 629Right-handed alpha
Helix 31
AD4
A
632 644Right-handed alpha
Helix 32
AD5
A
647 660Right-handed alpha
Helix 33
AD6
A
662 686Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5DQQ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 343first strand
Strand 2
A
382 384anti-parallel
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