Analysis of interatomic Contacts of Structural Units in PDB entry:
5E1S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E1S entry

There is 1 chain in PDB entry 5E1S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 983LYS 1283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 5E1S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
992 994Right-handed 310
Helix 2
AA2
A
1037 1052Right-handed alpha
Helix 3
AA3
A
1084 1091Right-handed alpha
Helix 4
AA4
A
1105 1126Right-handed alpha
Helix 5
AA5
A
1134 1136Right-handed 310
Helix 6
AA6
A
1172 1176Right-handed 310
Helix 7
AA7
A
1177 1184Right-handed alpha
Helix 8
AA8
A
1187 1205Right-handed alpha
Helix 9
AA9
A
1214 1224Right-handed alpha
Helix 10
AB1
A
1235 1246Right-handed alpha
Helix 11
AB2
A
1249 1253Right-handed 310
Helix 12
AB3
A
1255 1264Right-handed alpha
Helix 13
AB4
A
1265 1267Right-handed 310
Helix 14
AB5
A
1270 1275Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 5E1S. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
996 1004first strand
Strand 2
A
1009 1016anti-parallel
Strand 3
A
1024 1031anti-parallel
Strand 4
A
1073 1077anti-parallel
Strand 5
A
1062 1066anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1082 1083first strand
Strand 2
A
1138 1140anti-parallel
Strand 3
A
1146 1148anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il