Analysis of interatomic Contacts of Structural Units in PDB entry:
5EOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EOE entry

There are 2 chains in PDB entry 5EOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 21HIS 283
B
 ASP 21VAL 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5EOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 34Right-handed alpha
Helix 2
AA2
A
61 63Right-handed 310
Helix 3
AA3
A
64 78Right-handed alpha
Helix 4
AA4
A
90 94Right-handed 310
Helix 5
AA5
A
98 105Right-handed alpha
Helix 6
AA6
A
112 122Right-handed alpha
Helix 7
AA7
A
124 136Right-handed alpha
Helix 8
AA8
A
137 148Right-handed alpha
Helix 9
AA9
A
160 164Right-handed 310
Helix 10
AB1
A
175 189Right-handed alpha
Helix 11
AB2
A
193 206Right-handed alpha
Helix 12
AB3
A
213 218Right-handed 310
Helix 13
AB4
A
262 279Right-handed alpha
Helix 14
AB5
B
22 34Right-handed alpha
Helix 15
AB6
B
61 63Right-handed 310
Helix 16
AB7
B
64 78Right-handed alpha
Helix 17
AB8
B
90 94Right-handed 310
Helix 18
AB9
B
98 105Right-handed alpha
Helix 19
AC1
B
112 122Right-handed alpha
Helix 20
AC2
B
124 135Right-handed alpha
Helix 21
AC3
B
137 148Right-handed alpha
Helix 22
AC4
B
160 164Right-handed 310
Helix 23
AC5
B
175 189Right-handed alpha
Helix 24
AC6
B
193 206Right-handed alpha
Helix 25
AC7
B
213 218Right-handed 310
Helix 26
AC8
B
262 278Right-handed alpha
Helix 27
AC9
B
279 281Right-handed 310
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There are 6 sheets in PDB entry 5EOE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
249 257anti-parallel
Strand 4
A
235 243anti-parallel
Strand 5
A
223 231anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
173 174anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
109 111anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
36 43anti-parallel
Strand 3
B
249 257anti-parallel
Strand 4
B
235 243anti-parallel
Strand 5
B
223 231anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
173 174anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 88first strand
Strand 2
B
109 111anti-parallel
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