Analysis of interatomic Contacts of Structural Units in PDB entry:
5EQH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EQH entry

There is 1 chain in PDB entry 5EQH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 9THR 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5EQH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 32Right-handed alpha
Helix 2
AA2
A
36 53Right-handed alpha
Helix 3
AA3
A
57 91Right-handed alpha
Helix 4
AA4
A
92 99Right-handed alpha
Helix 5
AA5
A
99 112Right-handed alpha
Helix 6
AA6
A
118 146Right-handed alpha
Helix 7
AA7
A
149 157Right-handed alpha
Helix 8
AA8
A
158 174Right-handed alpha
Helix 9
AA9
A
185 192Right-handed alpha
Helix 10
AB1
A
193 204Right-handed alpha
Helix 11
AB2
A
205 207Right-handed 310
Helix 12
AB3
A
210 216Right-handed alpha
Helix 13
AB4
A
220 232Right-handed alpha
Helix 14
AB5
A
237 252Right-handed alpha
Helix 15
AB6
A
258 265Right-handed alpha
Helix 16
AB7
A
268 284Right-handed alpha
Helix 17
AB8
A
287 301Right-handed alpha
Helix 18
AB9
A
305 329Right-handed alpha
Helix 19
AC1
A
332 357Right-handed alpha
Helix 20
AC2
A
363 380Right-handed alpha
Helix 21
AC3
A
387 392Right-handed alpha
Helix 22
AC4
A
399 430Right-handed alpha
Helix 23
AC5
A
432 451Right-handed alpha
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There are no sheets in PDB entry 5EQH
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il