Analysis of interatomic Contacts of Structural Units in PDB entry:
5F5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5F5B entry

There are 2 chains in PDB entry 5F5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 91ALA 272
B
 VAL 500MET 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5F5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 114Right-handed alpha
Helix 2
AA2
A
115 124Right-handed alpha
Helix 3
AA3
A
128 132Right-handed 310
Helix 4
AA4
A
136 141Right-handed alpha
Helix 5
AA5
A
142 144Right-handed 310
Helix 6
AA6
A
147 170Right-handed alpha
Helix 7
AA7
A
170 194Right-handed alpha
Helix 8
AA8
A
200 217Right-handed alpha
Helix 9
AA9
A
218 222Right-handed 310
Helix 10
AB1
A
226 242Right-handed alpha
Helix 11
AB2
A
250 270Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5F5B.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 198first strand
Strand 2
B
501 502parallel
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