Analysis of interatomic Contacts of Structural Units in PDB entry:
5FBR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FBR entry

There are 2 chains in PDB entry 5FBR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 128SER 799
B
 TYR 8GLN 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5FBR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
128 135Right-handed alpha
Helix 2
AA2
A
140 151Right-handed alpha
Helix 3
AA3
A
153 164Right-handed alpha
Helix 4
AA4
A
165 167Right-handed 310
Helix 5
AA5
A
168 174Right-handed alpha
Helix 6
AA6
A
175 186Right-handed alpha
Helix 7
AA7
A
187 205Right-handed alpha
Helix 8
AA8
A
205 219Right-handed alpha
Helix 9
AA9
A
233 242Right-handed alpha
Helix 10
AB1
A
307 324Right-handed alpha
Helix 11
AB2
A
325 327Right-handed 310
Helix 12
AB3
A
329 347Right-handed alpha
Helix 13
AB4
A
367 371Right-handed 310
Helix 14
AB5
A
393 397Right-handed 310
Helix 15
AB6
A
536 548Right-handed alpha
Helix 16
AB7
A
569 589Right-handed alpha
Helix 17
AB8
A
619 627Right-handed alpha
Helix 18
AB9
A
629 639Right-handed alpha
Helix 19
AC1
A
643 667Right-handed alpha
Helix 20
AC2
A
711 718Right-handed alpha
Helix 21
AC3
A
723 742Right-handed alpha
Helix 22
AC4
A
743 755Right-handed alpha
Helix 23
AC5
A
760 764Right-handed 310
Helix 24
AC6
A
767 775Right-handed alpha
Helix 25
AC7
A
781 799Right-handed alpha
Helix 26
AC8
B
23 34Right-handed alpha
Helix 27
AC9
B
77 82Right-handed 310
Helix 28
AD1
B
95 101Right-handed alpha
Helix 29
AD2
B
101 113Right-handed alpha
Helix 30
AD3
B
128 132Right-handed 310
Helix 31
AD4
B
135 146Right-handed alpha
Helix 32
AD5
B
160 174Right-handed alpha
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There are 5 sheets in PDB entry 5FBR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 365first strand
Strand 2
A
382 390anti-parallel
Strand 3
A
372 373anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 365first strand
Strand 2
A
382 390anti-parallel
Strand 3
A
556 564anti-parallel
Strand 4
A
608 610anti-parallel
Strand 5
A
600 602anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
677 680anti-parallel
Strand 3
A
685 687anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 51first strand
Strand 2
B
62 66anti-parallel
Strand 3
B
12 18parallel
Strand 4
B
86 92parallel
Strand 5
B
118 124parallel
Strand 6
B
149 153parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 55first strand
Strand 2
B
58 59anti-parallel
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