Analysis of interatomic Contacts of Structural Units in PDB entry:
5FHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FHX entry

There are 3 chains in PDB entry 5FHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 6SER 129
H
ALA 1LYS 345
L
ASP 1ARG 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5FHX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 15Right-handed alpha
Helix 2
AA2
A
16 21Right-handed 310
Helix 3
AA3
A
22 26Right-handed 310
Helix 4
AA4
A
40 60Right-handed alpha
Helix 5
AA5
A
62 67Right-handed alpha
Helix 6
AA6
A
69 95Right-handed alpha
Helix 7
AA7
A
109 127Right-handed alpha
Helix 8
AA8
H
87 91Right-handed 310
Helix 9
AA9
H
210 214Right-handed 310
Helix 10
AB1
H
287 289Right-handed 310
Helix 11
AB2
H
333 335Right-handed 310
Helix 12
AB3
L
197 201Right-handed 310
Helix 13
AB4
L
244 251Right-handed alpha
Helix 14
AB5
L
306 312Right-handed alpha
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There are 18 sheets in PDB entry 5FHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 30first strand
Strand 2
A
106 108anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
117 121parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
117 121parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
107 113anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
130 131first strand
Strand 2
H
141 147anti-parallel
Strand 3
H
201 207anti-parallel
Strand 4
H
191 196anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
135 136first strand
Strand 2
H
236 240parallel
Strand 3
H
215 222anti-parallel
Strand 4
H
158 163anti-parallel
Strand 5
H
170 175anti-parallel
Strand 6
H
181 183anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
135 136first strand
Strand 2
H
236 240parallel
Strand 3
H
215 222anti-parallel
Strand 4
H
229 232anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
251 255first strand
Strand 2
H
266 276anti-parallel
Strand 3
H
307 316anti-parallel
Strand 4
H
294 296anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
251 255first strand
Strand 2
H
266 276anti-parallel
Strand 3
H
307 316anti-parallel
Strand 4
H
300 301anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
281 285first strand
Strand 2
H
326 331anti-parallel
Strand 3
H
336 341anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
5 7first strand
Strand 2
L
19 24anti-parallel
Strand 3
L
74 79anti-parallel
Strand 4
L
66 71anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
10 14first strand
Strand 2
L
106 111parallel
Strand 3
L
88 94anti-parallel
Strand 4
L
37 42anti-parallel
Strand 5
L
49 53anti-parallel
Strand 6
L
57 58anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
10 14first strand
Strand 2
L
106 111parallel
Strand 3
L
88 94anti-parallel
Strand 4
L
101 102anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
122 125first strand
Strand 2
L
137 143anti-parallel
Strand 3
L
188 193anti-parallel
Strand 4
L
180 185anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
128 131first strand
Strand 2
L
220 224parallel
Strand 3
L
203 208anti-parallel
Strand 4
L
151 156anti-parallel
Strand 5
L
163 167anti-parallel
Strand 6
L
171 172anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
128 131first strand
Strand 2
L
220 224parallel
Strand 3
L
203 208anti-parallel
Strand 4
L
215 216anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
237 241first strand
Strand 2
L
252 262anti-parallel
Strand 3
L
296 305anti-parallel
Strand 4
L
282 286anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
276 277first strand
Strand 2
L
268 273anti-parallel
Strand 3
L
314 320anti-parallel
Strand 4
L
328 333anti-parallel
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