Analysis of interatomic Contacts of Structural Units in PDB entry:
5FI2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FI2 entry

There are 4 chains in PDB entry 5FI2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 136	GLY 545
B	PRO 136	GLY 545
C	PRO 136	GLY 545
D	PRO 136	GLY 545

There are 79 helices in PDB entry 5FI2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	137	148	Right-handed alpha
Helix 2	AA2	A	155	165	Right-handed alpha
Helix 3	AA3	A	171	173	Right-handed 310
Helix 4	AA4	A	174	188	Right-handed alpha
Helix 5	AA5	A	195	204	Right-handed alpha
Helix 6	AA6	A	206	215	Right-handed alpha
Helix 7	AA7	A	222	239	Right-handed alpha
Helix 8	AA8	A	249	254	Right-handed alpha
Helix 9	AA9	A	286	300	Right-handed alpha
Helix 10	AB1	A	300	305	Right-handed alpha
Helix 11	AB2	A	333	342	Right-handed alpha
Helix 12	AB3	A	349	365	Right-handed alpha
Helix 13	AB4	A	373	383	Right-handed alpha
Helix 14	AB5	A	384	397	Right-handed alpha
Helix 15	AB6	A	405	418	Right-handed alpha
Helix 16	AB7	A	422	435	Right-handed alpha
Helix 17	AB8	A	448	463	Right-handed alpha
Helix 18	AB9	A	464	466	Right-handed 310
Helix 19	AC1	A	467	475	Right-handed alpha
Helix 20	AC2	A	510	524	Right-handed alpha
Helix 21	AC3	B	137	148	Right-handed alpha
Helix 22	AC4	B	155	165	Right-handed alpha
Helix 23	AC5	B	171	173	Right-handed 310
Helix 24	AC6	B	174	188	Right-handed alpha
Helix 25	AC7	B	195	204	Right-handed alpha
Helix 26	AC8	B	206	215	Right-handed alpha
Helix 27	AC9	B	222	238	Right-handed alpha
Helix 28	AD1	B	248	255	Right-handed 310
Helix 29	AD2	B	286	300	Right-handed alpha
Helix 30	AD3	B	300	305	Right-handed alpha
Helix 31	AD4	B	333	342	Right-handed alpha
Helix 32	AD5	B	349	365	Right-handed alpha
Helix 33	AD6	B	373	383	Right-handed alpha
Helix 34	AD7	B	384	397	Right-handed alpha
Helix 35	AD8	B	405	418	Right-handed alpha
Helix 36	AD9	B	422	435	Right-handed alpha
Helix 37	AE1	B	448	463	Right-handed alpha
Helix 38	AE2	B	464	466	Right-handed 310
Helix 39	AE3	B	467	475	Right-handed alpha
Helix 40	AE4	B	510	524	Right-handed alpha
Helix 41	AE5	C	137	148	Right-handed alpha
Helix 42	AE6	C	154	164	Right-handed alpha
Helix 43	AE7	C	171	173	Right-handed 310
Helix 44	AE8	C	174	185	Right-handed alpha
Helix 45	AE9	C	195	204	Right-handed alpha
Helix 46	AF1	C	206	215	Right-handed alpha
Helix 47	AF2	C	222	238	Right-handed alpha
Helix 48	AF3	C	286	300	Right-handed alpha
Helix 49	AF4	C	300	308	Right-handed alpha
Helix 50	AF5	C	333	342	Right-handed alpha
Helix 51	AF6	C	349	365	Right-handed alpha
Helix 52	AF7	C	373	383	Right-handed alpha
Helix 53	AF8	C	384	397	Right-handed alpha
Helix 54	AF9	C	405	417	Right-handed alpha
Helix 55	AG1	C	422	435	Right-handed alpha
Helix 56	AG2	C	448	463	Right-handed alpha
Helix 57	AG3	C	464	466	Right-handed 310
Helix 58	AG4	C	467	475	Right-handed alpha
Helix 59	AG5	C	510	524	Right-handed alpha
Helix 60	AG6	D	137	148	Right-handed alpha
Helix 61	AG7	D	154	164	Right-handed alpha
Helix 62	AG8	D	171	173	Right-handed 310
Helix 63	AG9	D	174	188	Right-handed alpha
Helix 64	AH1	D	195	204	Right-handed alpha
Helix 65	AH2	D	206	215	Right-handed alpha
Helix 66	AH3	D	222	239	Right-handed alpha
Helix 67	AH4	D	249	254	Right-handed alpha
Helix 68	AH5	D	286	300	Right-handed alpha
Helix 69	AH6	D	300	305	Right-handed alpha
Helix 70	AH7	D	333	344	Right-handed alpha
Helix 71	AH8	D	349	365	Right-handed alpha
Helix 72	AH9	D	373	382	Right-handed alpha
Helix 73	AI1	D	384	397	Right-handed alpha
Helix 74	AI2	D	405	418	Right-handed alpha
Helix 75	AI3	D	422	435	Right-handed alpha
Helix 76	AI4	D	448	463	Right-handed alpha
Helix 77	AI5	D	464	466	Right-handed 310
Helix 78	AI6	D	467	475	Right-handed alpha
Helix 79	AI7	D	510	524	Right-handed alpha

There are 12 sheets in PDB entry 5FI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	154	first strand
Strand 2	A	193	194	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	245	first strand
Strand 2	A	503	504	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	275	first strand
Strand 2	A	261	266	anti-parallel
Strand 3	A	495	500	anti-parallel
Strand 4	A	486	491	anti-parallel
Strand 5	A	479	481	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	281	282	first strand
Strand 2	A	419	421	anti-parallel
Strand 3	A	370	372	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	154	first strand
Strand 2	B	193	194	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	275	first strand
Strand 2	B	261	266	anti-parallel
Strand 3	B	495	500	anti-parallel
Strand 4	B	486	491	anti-parallel
Strand 5	B	479	481	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	282	first strand
Strand 2	B	419	421	anti-parallel
Strand 3	B	371	372	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	275	first strand
Strand 2	C	261	266	anti-parallel
Strand 3	C	495	500	anti-parallel
Strand 4	C	486	491	anti-parallel
Strand 5	C	479	481	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	281	282	first strand
Strand 2	C	419	421	anti-parallel
Strand 3	C	370	372	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	244	245	first strand
Strand 2	D	503	504	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	271	275	first strand
Strand 2	D	261	266	anti-parallel
Strand 3	D	495	500	anti-parallel
Strand 4	D	486	491	anti-parallel
Strand 5	D	479	481	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	281	282	first strand
Strand 2	D	419	421	anti-parallel
Strand 3	D	371	372	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FI2

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FI2