Analysis of interatomic Contacts of Structural Units in PDB entry:
5FOR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FOR entry

There are 4 chains in PDB entry 5FOR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6GLN 37
A
 ILE 39HIS 77
A
 PRO 79LYS 135
A
 ALA 137SER 139
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5FOR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 16Right-handed 310
Helix 2
2
A
17 31Right-handed alpha
Helix 3
3
A
51 61Right-handed alpha
Helix 4
4
A
69 77Right-handed alpha
Helix 5
5
A
81 89Right-handed alpha
Helix 6
6
A
91 93Right-handed 310
Helix 7
7
A
105 111Right-handed 310
Helix 8
8
A
114 118Right-handed 310
Helix 9
9
A
126 139Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 5FOR.

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
9 13parallel
Strand 3
A
63 68parallel
Strand 4
A
95 99parallel
Strand 5
A
119 121parallel
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