Analysis of interatomic Contacts of Structural Units in PDB entry:
5FWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FWI entry

There is 1 chain in PDB entry 5FWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 HIS 210LEU 881
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5FWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
223 234Right-handed alpha
Helix 2
2
C
235 244Right-handed alpha
Helix 3
3
C
255 270Right-handed alpha
Helix 4
4
C
276 284Right-handed alpha
Helix 5
5
C
287 294Right-handed alpha
Helix 6
6
C
295 311Right-handed alpha
Helix 7
7
C
318 325Right-handed alpha
Helix 8
8
C
359 369Right-handed alpha
Helix 9
9
C
434 436Right-handed 310
Helix 10
10
C
489 494Right-handed alpha
Helix 11
11
C
495 498Right-handed 310
Helix 12
12
C
523 528Right-handed alpha
Helix 13
13
C
532 536Right-handed 310
Helix 14
14
C
537 563Right-handed alpha
Helix 15
15
C
572 576Right-handed alpha
Helix 16
16
C
601 614Right-handed alpha
Helix 17
17
C
616 618Right-handed 310
Helix 18
18
C
639 644Right-handed alpha
Helix 19
19
C
647 652Right-handed alpha
Helix 20
20
C
666 671Right-handed alpha
Helix 21
21
C
712 725Right-handed alpha
Helix 22
22
C
752 757Right-handed alpha
Helix 23
23
C
772 778Right-handed 310
Helix 24
24
C
782 792Right-handed alpha
Helix 25
25
C
818 830Right-handed alpha
Helix 26
26
C
833 835Right-handed 310
Helix 27
27
C
860 866Right-handed alpha
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There are 7 sheets in PDB entry 5FWI. Click on sheet of interest to get list of strands forming it: CA, CB, CC, CD, CE, CF, CG,

There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
340 347first strand
Strand 2
C
326 334anti-parallel
Strand 3
C
389 395anti-parallel
Strand 4
C
371 373anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
350 352first strand
Strand 2
C
401 406parallel
Strand 3
C
511 520anti-parallel
Strand 4
C
447 457anti-parallel
Strand 5
C
465 469anti-parallel
Strand 6
C
477 481anti-parallel
Strand 7
C
484 488anti-parallel
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There are 5 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
350 352first strand
Strand 2
C
401 406parallel
Strand 3
C
511 520anti-parallel
Strand 4
C
447 457anti-parallel
Strand 5
C
430 432anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
379 380first strand
Strand 2
C
386 387anti-parallel
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There are 5 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
592 597first strand
Strand 2
C
564 571anti-parallel
Strand 3
C
657 664parallel
Strand 4
C
620 627anti-parallel
Strand 5
C
633 635anti-parallel
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There are 5 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
698 708first strand
Strand 2
C
684 693anti-parallel
Strand 3
C
765 770parallel
Strand 4
C
732 739anti-parallel
Strand 5
C
742 745anti-parallel
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There are 5 strands in CG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
809 814first strand
Strand 2
C
793 800anti-parallel
Strand 3
C
874 880parallel
Strand 4
C
837 842anti-parallel
Strand 5
C
849 853anti-parallel
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