Analysis of interatomic Contacts of Structural Units in PDB entry:
5FWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FWV entry

There is 1 chain in PDB entry 5FWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29LYS 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5FWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 78Right-handed 310
Helix 2
2
A
143 154Right-handed alpha
Helix 3
3
A
174 178Right-handed 310
Helix 4
4
A
182 186Right-handed 310
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There are 5 sheets in PDB entry 5FWV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
106 108anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
166 170anti-parallel
Strand 3
A
158 162anti-parallel
Strand 4
A
203 208anti-parallel
Strand 5
A
119 124anti-parallel
Strand 6
A
180 181anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
193 197anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
239 245parallel
Strand 3
A
298 304anti-parallel
Strand 4
A
267 272anti-parallel
Strand 5
A
278 283anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 226first strand
Strand 2
A
313 321anti-parallel
Strand 3
A
251 260anti-parallel
Strand 4
A
292 294anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il