Analysis of interatomic Contacts of Structural Units in PDB entry:
5HJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HJQ entry

There is 1 chain in PDB entry 5HJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 55ARG 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5HJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 69Right-handed alpha
Helix 2
AA2
A
70 81Right-handed alpha
Helix 3
AA3
A
89 100Right-handed alpha
Helix 4
AA4
A
110 121Right-handed alpha
Helix 5
AA5
A
137 141Right-handed 310
Helix 6
AA6
A
147 165Right-handed alpha
Helix 7
AA7
A
173 182Right-handed alpha
Helix 8
AA8
A
186 199Right-handed alpha
Helix 9
AA9
A
209 228Right-handed alpha
Helix 10
AB1
A
228 239Right-handed alpha
Helix 11
AB2
A
244 249Right-handed alpha
Helix 12
AB3
A
250 257Right-handed alpha
Helix 13
AB4
A
260 275Right-handed alpha
Helix 14
AB5
A
276 295Right-handed alpha
Helix 15
AB6
A
301 306Right-handed alpha
Helix 16
AB7
A
308 319Right-handed alpha
Helix 17
AB8
A
323 334Right-handed alpha
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There are no sheets in PDB entry 5HJQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il