Analysis of interatomic Contacts of Structural Units in PDB entry:
5HRN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5HRN entry

There is 1 chain in PDB entry 5HRN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 57ILE 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 5HRN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 108Right-handed alpha
Helix 2
AA2
A
117 122Right-handed 310
Helix 3
AA3
A
123 134Right-handed alpha
Helix 4
AA4
A
144 148Right-handed 310
Helix 5
AA5
A
149 166Right-handed alpha
Helix 6
AA6
A
167 169Right-handed 310
Helix 7
AA7
A
171 186Right-handed alpha
Helix 8
AA8
A
195 208Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5HRN.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
71 78anti-parallel
Strand 3
A
60 68anti-parallel
Strand 4
A
112 114parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il