Analysis of interatomic Contacts of Structural Units in PDB entry:
5I73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I73 entry

There are 3 chains in PDB entry 5I73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 77THR 616
B
 GLU 20PRO 237
C
 ASP 21CYS 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5I73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 97Right-handed alpha
Helix 2
AA2
A
98 112Right-handed alpha
Helix 3
AA3
A
113 116Right-handed 310
Helix 4
AA4
A
117 127Right-handed alpha
Helix 5
AA5
A
129 144Right-handed alpha
Helix 6
AA6
A
148 153Right-handed alpha
Helix 7
AA7
A
155 158Right-handed 310
Helix 8
AA8
A
159 173Right-handed alpha
Helix 9
AA9
A
175 189Right-handed alpha
Helix 10
AB1
A
195 199Right-handed 310
Helix 11
AB2
A
226 235Right-handed alpha
Helix 12
AB3
A
238 242Right-handed 310
Helix 13
AB4
A
252 266Right-handed alpha
Helix 14
AB5
A
266 271Right-handed alpha
Helix 15
AB6
A
280 285Right-handed alpha
Helix 16
AB7
A
286 302Right-handed alpha
Helix 17
AB8
A
305 314Right-handed alpha
Helix 18
AB9
A
316 321Right-handed 310
Helix 19
AC1
A
322 338Right-handed alpha
Helix 20
AC2
A
342 350Right-handed alpha
Helix 21
AC3
A
357 390Right-handed alpha
Helix 22
AC4
A
393 398Right-handed alpha
Helix 23
AC5
A
403 408Right-handed alpha
Helix 24
AC6
A
408 416Right-handed alpha
Helix 25
AC7
A
419 454Right-handed alpha
Helix 26
AC8
A
461 476Right-handed alpha
Helix 27
AC9
A
485 496Right-handed alpha
Helix 28
AD1
A
496 515Right-handed alpha
Helix 29
AD2
A
517 529Right-handed alpha
Helix 30
AD3
A
534 543Right-handed alpha
Helix 31
AD4
A
543 559Right-handed alpha
Helix 32
AD5
A
573 584Right-handed alpha
Helix 33
AD6
A
587 600Right-handed alpha
Helix 34
AD7
A
603 613Right-handed alpha
Helix 35
AD8
B
47 51Right-handed 310
Helix 36
AD9
B
106 110Right-handed 310
Helix 37
AE1
B
181 183Right-handed 310
Helix 38
AE2
C
99 103Right-handed 310
Helix 39
AE3
C
141 148Right-handed alpha
Helix 40
AE4
C
203 207Right-handed alpha
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There are 8 sheets in PDB entry 5I73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 25first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
97 102anti-parallel
Strand 4
B
87 92anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
132 136parallel
Strand 3
B
112 118anti-parallel
Strand 4
B
52 58anti-parallel
Strand 5
B
64 71anti-parallel
Strand 6
B
76 79anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 148first strand
Strand 2
B
160 170anti-parallel
Strand 3
B
199 209anti-parallel
Strand 4
B
188 196anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 179first strand
Strand 2
B
219 224anti-parallel
Strand 3
B
229 234anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 34first strand
Strand 2
C
122 127parallel
Strand 3
C
105 110anti-parallel
Strand 4
C
53 58anti-parallel
Strand 5
C
65 69anti-parallel
Strand 6
C
73 74anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 44first strand
Strand 2
C
90 95anti-parallel
Strand 3
C
82 86anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 138first strand
Strand 2
C
149 159anti-parallel
Strand 3
C
193 202anti-parallel
Strand 4
C
179 183anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
174 175first strand
Strand 2
C
165 169anti-parallel
Strand 3
C
211 217anti-parallel
Strand 4
C
225 230anti-parallel
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