Analysis of interatomic Contacts of Structural Units in PDB entry:
5IU4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IU4 entry

There is 1 chain in PDB entry 5IU4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY -1SER 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5IU4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 34Right-handed alpha
Helix 2
AA2
A
35 38Right-handed 310
Helix 3
AA3
A
39 58Right-handed alpha
Helix 4
AA4
A
58 68Right-handed alpha
Helix 5
AA5
A
74 108Right-handed alpha
Helix 6
AA6
A
108 116Right-handed alpha
Helix 7
AA7
A
117 137Right-handed alpha
Helix 8
AA8
A
138 142Right-handed 310
Helix 9
AA9
A
150 157Right-handed alpha
Helix 10
AB1
A
167 172Right-handed alpha
Helix 11
AB2
A
173 180Right-handed alpha
Helix 12
AB3
A
186 1019Right-handed alpha
Helix 13
AB4
A
1022 1042Right-handed alpha
Helix 14
AB5
A
1059 1081Right-handed alpha
Helix 15
AB6
A
1083 1101Right-handed alpha
Helix 16
AB7
A
1101 259Right-handed alpha
Helix 17
AB8
A
266 292Right-handed alpha
Helix 18
AB9
A
292 305Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5IU4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
71 73first strand
Strand 2
A
163 165anti-parallel
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