Analysis of interatomic Contacts of Structural Units in PDB entry:
5IUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IUT entry

There is 1 chain in PDB entry 5IUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 29HIS 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5IUT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 63Right-handed alpha
Helix 2
AA2
A
80 89Right-handed alpha
Helix 3
AA3
A
104 109Right-handed alpha
Helix 4
AA4
A
117 133Right-handed alpha
Helix 5
AA5
A
141 160Right-handed alpha
Helix 6
AA6
A
167 185Right-handed alpha
Helix 7
AA7
A
192 211Right-handed alpha
Helix 8
AA8
A
211 225Right-handed alpha
Helix 9
AA9
A
229 256Right-handed alpha
Helix 10
AB1
A
263 275Right-handed alpha
Helix 11
AB2
A
284 300Right-handed alpha
Helix 12
AB3
A
300 317Right-handed alpha
Helix 13
AB4
A
317 332Right-handed alpha
Helix 14
AB5
A
339 345Right-handed 310
Helix 15
AB6
A
346 361Right-handed alpha
Helix 16
AB7
A
391 397Right-handed alpha
Helix 17
AB8
A
409 414Right-handed 310
Helix 18
AB9
A
431 435Right-handed 310
Helix 19
AC1
A
438 456Right-handed alpha
Helix 20
AC2
A
464 468Right-handed 310
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There are 3 sheets in PDB entry 5IUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
387 390parallel
Strand 4
A
369 370anti-parallel
Strand 5
A
97 98anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 377first strand
Strand 2
A
380 382anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 460first strand
Strand 2
A
487 490anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il