Analysis of interatomic Contacts of Structural Units in PDB entry:
5IW3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IW3 entry

There is 1 chain in PDB entry 5IW3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 259LEU 466
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5IW3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
269 275Right-handed alpha
Helix 2
AA2
A
332 338Right-handed alpha
Helix 3
AA3
A
377 383Right-handed 310
Helix 4
AA4
A
437 442Right-handed alpha
Helix 5
AA5
A
455 459Right-handed 310
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There are 6 sheets in PDB entry 5IW3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 266first strand
Strand 2
A
281 290anti-parallel
Strand 3
A
322 330anti-parallel
Strand 4
A
311 312anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 266first strand
Strand 2
A
281 290anti-parallel
Strand 3
A
322 330anti-parallel
Strand 4
A
316 317anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
297 302anti-parallel
Strand 3
A
342 347anti-parallel
Strand 4
A
355 359anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 374first strand
Strand 2
A
385 395anti-parallel
Strand 3
A
427 436anti-parallel
Strand 4
A
414 416anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 374first strand
Strand 2
A
385 395anti-parallel
Strand 3
A
427 436anti-parallel
Strand 4
A
420 421anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
401 406anti-parallel
Strand 3
A
446 451anti-parallel
Strand 4
A
460 464anti-parallel
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