Analysis of interatomic Contacts of Structural Units in PDB entry:
5JO3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JO3 entry

There is 1 chain in PDB entry 5JO3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 537GLU 858
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5JO3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
538 546Right-handed alpha
Helix 2
AA2
B
550 555Right-handed alpha
Helix 3
AA3
B
567 582Right-handed alpha
Helix 4
AA4
B
591 605Right-handed alpha
Helix 5
AA5
B
614 630Right-handed alpha
Helix 6
AA6
B
634 638Right-handed 310
Helix 7
AA7
B
639 653Right-handed alpha
Helix 8
AA8
B
661 668Right-handed alpha
Helix 9
AA9
B
670 676Right-handed alpha
Helix 10
AB1
B
680 694Right-handed alpha
Helix 11
AB2
B
705 723Right-handed alpha
Helix 12
AB3
B
724 741Right-handed alpha
Helix 13
AB4
B
748 765Right-handed alpha
Helix 14
AB5
B
766 770Right-handed 310
Helix 15
AB6
B
771 798Right-handed alpha
Helix 16
AB7
B
802 811Right-handed 310
Helix 17
AB8
B
812 825Right-handed alpha
Helix 18
AB9
B
825 836Right-handed alpha
Helix 19
AC1
B
839 858Right-handed alpha
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There are no sheets in PDB entry 5JO3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il