Analysis of interatomic Contacts of Structural Units in PDB entry:
5JYN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5JYN entry

There are 3 chains in PDB entry 5JYN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 677SER 716
B
 ASN 677SER 716
C
 ASN 677SER 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5JYN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
678 696Right-handed alpha
Helix 2
AA2
A
697 711Right-handed alpha
Helix 3
AA3
B
678 697Right-handed alpha
Helix 4
AA4
B
698 712Right-handed alpha
Helix 5
AA5
C
678 696Right-handed alpha
Helix 6
AA6
C
698 710Right-handed alpha
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There are no sheets in PDB entry 5JYN
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il