Analysis of interatomic Contacts of Structural Units in PDB entry:
5K1I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5K1I entry

There are 4 chains in PDB entry 5K1I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 87PRO 411
B
 THR 86PRO 411
C
 GLU 87PRO 411
D
 THR 86ARG 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are169 helices in PDB entry 5K1I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 97Right-handed alpha
Helix 2
AA2
A
105 113Right-handed alpha
Helix 3
AA3
A
116 129Right-handed alpha
Helix 4
AA4
A
130 135Right-handed alpha
Helix 5
AA5
A
138 152Right-handed alpha
Helix 6
AA6
A
161 177Right-handed alpha
Helix 7
AA7
A
178 182Right-handed 310
Helix 8
AA8
A
186 200Right-handed alpha
Helix 9
AA9
A
208 215Right-handed alpha
Helix 10
AB1
A
217 223Right-handed alpha
Helix 11
AB2
A
227 241Right-handed alpha
Helix 12
AB3
A
253 271Right-handed alpha
Helix 13
AB4
A
275 289Right-handed alpha
Helix 14
AB5
A
302 319Right-handed alpha
Helix 15
AB6
A
320 324Right-handed 310
Helix 16
AB7
A
325 351Right-handed alpha
Helix 17
AB8
A
364 376Right-handed alpha
Helix 18
AB9
A
376 388Right-handed alpha
Helix 19
AC1
A
392 409Right-handed alpha
Helix 20
AC2
B
87 97Right-handed alpha
Helix 21
AC3
B
105 113Right-handed alpha
Helix 22
AC4
B
116 129Right-handed alpha
Helix 23
AC5
B
130 136Right-handed alpha
Helix 24
AC6
B
138 152Right-handed alpha
Helix 25
AC7
B
161 177Right-handed alpha
Helix 26
AC8
B
178 182Right-handed 310
Helix 27
AC9
B
186 200Right-handed alpha
Helix 28
AD1
B
208 215Right-handed alpha
Helix 29
AD2
B
217 224Right-handed alpha
Helix 30
AD3
B
227 241Right-handed alpha
Helix 31
AD4
B
253 269Right-handed alpha
Helix 32
AD5
B
270 274Right-handed 310
Helix 33
AD6
B
275 290Right-handed alpha
Helix 34
AD7
B
302 319Right-handed alpha
Helix 35
AD8
B
320 324Right-handed 310
Helix 36
AD9
B
325 350Right-handed alpha
Helix 37
AE1
B
364 376Right-handed alpha
Helix 38
AE2
B
376 388Right-handed alpha
Helix 39
AE3
B
392 410Right-handed alpha
Helix 40
AE4
C
88 96Right-handed alpha
Helix 41
AE5
C
97 99Right-handed 310
Helix 42
AE6
C
105 113Right-handed alpha
Helix 43
AE7
C
116 130Right-handed alpha
Helix 44
AE8
C
130 136Right-handed alpha
Helix 45
AE9
C
138 152Right-handed alpha
Helix 46
AF1
C
161 177Right-handed alpha
Helix 47
AF2
C
178 182Right-handed 310
Helix 48
AF3
C
186 200Right-handed alpha
Helix 49
AF4
C
208 215Right-handed alpha
Helix 50
AF5
C
217 223Right-handed alpha
Helix 51
AF6
C
227 240Right-handed alpha
Helix 52
AF7
C
241 243Right-handed 310
Helix 53
AF8
C
253 270Right-handed alpha
Helix 54
AF9
C
271 274Right-handed 310
Helix 55
AG1
C
275 289Right-handed alpha
Helix 56
AG2
C
302 319Right-handed alpha
Helix 57
AG3
C
320 324Right-handed 310
Helix 58
AG4
C
325 350Right-handed alpha
Helix 59
AG5
C
364 376Right-handed alpha
Helix 60
AG6
C
376 388Right-handed alpha
Helix 61
AG7
C
392 409Right-handed alpha
Helix 62
AG8
D
87 97Right-handed alpha
Helix 63
AG9
D
105 113Right-handed alpha
Helix 64
AH1
D
116 129Right-handed alpha
Helix 65
AH2
D
130 136Right-handed alpha
Helix 66
AH3
D
138 153Right-handed alpha
Helix 67
AH4
D
161 177Right-handed alpha
Helix 68
AH5
D
178 182Right-handed 310
Helix 69
AH6
D
186 200Right-handed alpha
Helix 70
AH7
D
208 215Right-handed alpha
Helix 71
AH8
D
217 223Right-handed alpha
Helix 72
AH9
D
227 240Right-handed alpha
Helix 73
AI1
D
241 243Right-handed 310
Helix 74
AI2
D
253 271Right-handed alpha
Helix 75
AI3
D
272 274Right-handed 310
Helix 76
AI4
D
275 289Right-handed alpha
Helix 77
AI5
D
302 319Right-handed alpha
Helix 78
AI6
D
320 324Right-handed 310
Helix 79
AI7
D
325 350Right-handed alpha
Helix 80
AI8
D
364 376Right-handed alpha
Helix 81
AI9
D
376 388Right-handed alpha
Helix 82
AJ1
D
392 409Right-handed alpha
Helix 83
AJ2
E
88 97Right-handed alpha
Helix 84
AJ3
E
105 113Right-handed alpha
Helix 85
AJ4
E
116 130Right-handed alpha
Helix 86
AJ5
E
130 135Right-handed alpha
Helix 87
AJ6
E
138 153Right-handed alpha
Helix 88
AJ7
E
161 177Right-handed alpha
Helix 89
AJ8
E
178 182Right-handed 310
Helix 90
AJ9
E
186 200Right-handed alpha
Helix 91
AK1
E
208 215Right-handed alpha
Helix 92
AK2
E
217 223Right-handed alpha
Helix 93
AK3
E
227 240Right-handed alpha
Helix 94
AK4
E
241 243Right-handed 310
Helix 95
AK5
E
253 269Right-handed alpha
Helix 96
AK6
E
270 274Right-handed 310
Helix 97
AK7
E
275 289Right-handed alpha
Helix 98
AK8
E
302 319Right-handed alpha
Helix 99
AK9
E
320 324Right-handed 310
Helix 100
AL1
E
325 350Right-handed alpha
Helix 101
AL2
E
364 376Right-handed alpha
Helix 102
AL3
E
376 388Right-handed alpha
Helix 103
AL4
E
392 410Right-handed alpha
Helix 104
AL5
F
88 97Right-handed alpha
Helix 105
AL6
F
98 101Right-handed 310
Helix 106
AL7
F
105 113Right-handed alpha
Helix 107
AL8
F
116 129Right-handed alpha
Helix 108
AL9
F
130 135Right-handed alpha
Helix 109
AM1
F
138 152Right-handed alpha
Helix 110
AM2
F
161 177Right-handed alpha
Helix 111
AM3
F
178 182Right-handed 310
Helix 112
AM4
F
186 200Right-handed alpha
Helix 113
AM5
F
208 215Right-handed alpha
Helix 114
AM6
F
217 223Right-handed alpha
Helix 115
AM7
F
227 242Right-handed alpha
Helix 116
AM8
F
253 270Right-handed alpha
Helix 117
AM9
F
275 289Right-handed alpha
Helix 118
AN1
F
302 319Right-handed alpha
Helix 119
AN2
F
320 324Right-handed 310
Helix 120
AN3
F
325 351Right-handed alpha
Helix 121
AN4
F
359 363Right-handed 310
Helix 122
AN5
F
364 376Right-handed alpha
Helix 123
AN6
F
376 388Right-handed alpha
Helix 124
AN7
F
392 409Right-handed alpha
Helix 125
AN8
G
88 97Right-handed alpha
Helix 126
AN9
G
98 101Right-handed 310
Helix 127
AO1
G
105 113Right-handed alpha
Helix 128
AO2
G
116 129Right-handed alpha
Helix 129
AO3
G
130 135Right-handed alpha
Helix 130
AO4
G
138 152Right-handed alpha
Helix 131
AO5
G
161 177Right-handed alpha
Helix 132
AO6
G
178 182Right-handed 310
Helix 133
AO7
G
186 200Right-handed alpha
Helix 134
AO8
G
208 215Right-handed alpha
Helix 135
AO9
G
217 223Right-handed alpha
Helix 136
AP1
G
227 240Right-handed alpha
Helix 137
AP2
G
241 243Right-handed 310
Helix 138
AP3
G
253 270Right-handed alpha
Helix 139
AP4
G
271 274Right-handed 310
Helix 140
AP5
G
275 289Right-handed alpha
Helix 141
AP6
G
302 319Right-handed alpha
Helix 142
AP7
G
320 324Right-handed 310
Helix 143
AP8
G
325 350Right-handed alpha
Helix 144
AP9
G
364 376Right-handed alpha
Helix 145
AQ1
G
376 388Right-handed alpha
Helix 146
AQ2
G
392 410Right-handed alpha
Helix 147
AQ3
H
87 97Right-handed alpha
Helix 148
AQ4
H
98 101Right-handed 310
Helix 149
AQ5
H
105 113Right-handed alpha
Helix 150
AQ6
H
116 130Right-handed alpha
Helix 151
AQ7
H
130 136Right-handed alpha
Helix 152
AQ8
H
138 151Right-handed alpha
Helix 153
AQ9
H
161 177Right-handed alpha
Helix 154
AR1
H
178 182Right-handed 310
Helix 155
AR2
H
186 200Right-handed alpha
Helix 156
AR3
H
208 215Right-handed alpha
Helix 157
AR4
H
217 223Right-handed alpha
Helix 158
AR5
H
227 240Right-handed alpha
Helix 159
AR6
H
241 243Right-handed 310
Helix 160
AR7
H
253 270Right-handed alpha
Helix 161
AR8
H
271 274Right-handed 310
Helix 162
AR9
H
275 289Right-handed alpha
Helix 163
AS1
H
302 319Right-handed alpha
Helix 164
AS2
H
320 324Right-handed 310
Helix 165
AS3
H
325 350Right-handed alpha
Helix 166
AS4
H
359 363Right-handed 310
Helix 167
AS5
H
364 376Right-handed alpha
Helix 168
AS6
H
376 388Right-handed alpha
Helix 169
AS7
H
392 409Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5K1I.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
292 293first strand
Strand 2
F
297 298anti-parallel
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