Analysis of interatomic Contacts of Structural Units in PDB entry:
5K7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5K7L entry

There are 2 chains in PDB entry 5K7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10GLU 722
B
 GLU 6ALA 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5K7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 26Right-handed alpha
Helix 2
AA2
A
46 54Right-handed alpha
Helix 3
AA3
A
56 61Right-handed alpha
Helix 4
AA4
A
76 90Right-handed alpha
Helix 5
AA5
A
146 158Right-handed alpha
Helix 6
AA6
A
159 164Right-handed alpha
Helix 7
AA7
A
174 194Right-handed alpha
Helix 8
AA8
A
214 242Right-handed alpha
Helix 9
AA9
A
247 271Right-handed alpha
Helix 10
AB1
A
283 295Right-handed alpha
Helix 11
AB2
A
295 303Right-handed alpha
Helix 12
AB3
A
305 314Right-handed alpha
Helix 13
AB4
A
316 326Right-handed alpha
Helix 14
AB5
A
327 336Right-handed 310
Helix 15
AB6
A
337 345Right-handed alpha
Helix 16
AB7
A
348 379Right-handed alpha
Helix 17
AB8
A
390 400Right-handed alpha
Helix 18
AB9
A
418 436Right-handed alpha
Helix 19
AC1
A
446 499Right-handed alpha
Helix 20
AC2
A
502 521Right-handed alpha
Helix 21
AC3
A
524 532Right-handed alpha
Helix 22
AC4
A
533 545Right-handed alpha
Helix 23
AC5
A
545 552Right-handed alpha
Helix 24
AC6
A
559 570Right-handed alpha
Helix 25
AC7
A
620 625Right-handed alpha
Helix 26
AC8
A
647 657Right-handed alpha
Helix 27
AC9
A
657 668Right-handed alpha
Helix 28
AD1
A
682 694Right-handed alpha
Helix 29
AD2
A
706 722Right-handed alpha
Helix 30
AD3
B
12 20Right-handed alpha
Helix 31
AD4
B
28 40Right-handed alpha
Helix 32
AD5
B
44 56Right-handed alpha
Helix 33
AD6
B
64 77Right-handed alpha
Helix 34
AD7
B
79 93Right-handed alpha
Helix 35
AD8
B
101 113Right-handed alpha
Helix 36
AD9
B
117 129Right-handed alpha
Helix 37
AE1
B
137 147Right-handed alpha
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There are 4 sheets in PDB entry 5K7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
29 34anti-parallel
Strand 3
A
125 130anti-parallel
Strand 4
A
107 116anti-parallel
Strand 5
A
93 99anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 575first strand
Strand 2
A
640 646anti-parallel
Strand 3
A
590 596anti-parallel
Strand 4
A
615 618anti-parallel
Strand 5
A
672 673parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 588first strand
Strand 2
A
628 629anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
607 611first strand
Strand 2
A
599 602anti-parallel
Strand 3
A
633 636anti-parallel
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