Analysis of interatomic Contacts of Structural Units in PDB entry:
5K9R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5K9R entry

There are 2 chains in PDB entry 5K9R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 448GLU 759
B
 GLY 448GLU 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5K9R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
460 464Right-handed 310
Helix 2
AA2
A
472 474Right-handed 310
Helix 3
AA3
A
475 489Right-handed alpha
Helix 4
AA4
A
494 508Right-handed alpha
Helix 5
AA5
A
516 534Right-handed alpha
Helix 6
AA6
A
539 552Right-handed alpha
Helix 7
AA7
A
561 568Right-handed alpha
Helix 8
AA8
A
570 576Right-handed alpha
Helix 9
AA9
A
579 595Right-handed alpha
Helix 10
AB1
A
599 604Right-handed 310
Helix 11
AB2
A
605 622Right-handed alpha
Helix 12
AB3
A
624 641Right-handed alpha
Helix 13
AB4
A
648 665Right-handed alpha
Helix 14
AB5
A
666 670Right-handed 310
Helix 15
AB6
A
671 696Right-handed alpha
Helix 16
AB7
A
701 710Right-handed 310
Helix 17
AB8
A
711 723Right-handed alpha
Helix 18
AB9
A
723 735Right-handed alpha
Helix 19
AC1
A
736 738Right-handed 310
Helix 20
AC2
A
739 757Right-handed alpha
Helix 21
AC3
B
455 462Right-handed alpha
Helix 22
AC4
B
469 474Right-handed 310
Helix 23
AC5
B
475 489Right-handed alpha
Helix 24
AC6
B
494 508Right-handed alpha
Helix 25
AC7
B
516 534Right-handed alpha
Helix 26
AC8
B
539 553Right-handed alpha
Helix 27
AC9
B
561 568Right-handed alpha
Helix 28
AD1
B
570 576Right-handed alpha
Helix 29
AD2
B
579 594Right-handed alpha
Helix 30
AD3
B
605 623Right-handed alpha
Helix 31
AD4
B
624 641Right-handed alpha
Helix 32
AD5
B
648 665Right-handed alpha
Helix 33
AD6
B
666 670Right-handed 310
Helix 34
AD7
B
671 696Right-handed alpha
Helix 35
AD8
B
701 710Right-handed 310
Helix 36
AD9
B
711 723Right-handed alpha
Helix 37
AE1
B
723 735Right-handed alpha
Helix 38
AE2
B
738 757Right-handed alpha
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There are no sheets in PDB entry 5K9R
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