Analysis of interatomic Contacts of Structural Units in PDB entry:
5KTQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5KTQ entry

There is 1 chain in PDB entry 5KTQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 290GLU 832
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5KTQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
338 343Right-handed alpha
Helix 2
2
A
353 362Right-handed alpha
Helix 3
3
A
373 380Right-handed alpha
Helix 4
4
A
387 394Right-handed alpha
Helix 5
5
A
402 421Right-handed alpha
Helix 6
6
A
424 432Right-handed alpha
Helix 7
7
A
434 447Right-handed alpha
Helix 8
8
A
453 478Right-handed alpha
Helix 9
9
A
487 494Right-handed alpha
Helix 10
10
A
518 522Right-handed 310
Helix 11
11
A
533 545Right-handed alpha
Helix 12
12
A
549 552Right-handed 310
Helix 13
13
A
581 583Right-handed 310
Helix 14
14
A
591 597Right-handed alpha
Helix 15
15
A
614 623Right-handed alpha
Helix 16
16
A
626 633Right-handed alpha
Helix 17
17
A
638 647Right-handed alpha
Helix 18
18
A
658 671Right-handed alpha
Helix 19
19
A
675 681Right-handed alpha
Helix 20
20
A
686 699Right-handed alpha
Helix 21
21
A
701 717Right-handed alpha
Helix 22
22
A
738 773Right-handed alpha
Helix 23
23
A
796 808Right-handed alpha
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There are 3 sheets in PDB entry 5KTQ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
819 824first strand
Strand 2
A
604 611anti-parallel
Strand 3
A
786 792anti-parallel
Strand 4
A
777 783anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 721first strand
Strand 2
A
727 729anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 311first strand
Strand 2
A
321 327anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il