Analysis of interatomic Contacts of Structural Units in PDB entry:
5L08


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L08 entry

There are 9 chains in PDB entry 5L08 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2SER 182
B
 ASP 2SER 182
C
 ASP 2SER 182
D
 ASP 2SER 182
E
 ASP 2SER 182
F
 ASP 2SER 182
G
 ASP 2SER 182
H
 ASP 2SER 182
I
 ASP 2SER 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are138 helices in PDB entry 5L08. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
8 13Right-handed 310
Helix 3
AA3
A
15 27Right-handed alpha
Helix 4
AA4
A
40 51Right-handed alpha
Helix 5
AA5
A
59 69Right-handed alpha
Helix 6
AA6
A
71 78Right-handed alpha
Helix 7
AA7
A
82 91Right-handed 310
Helix 8
AA8
A
99 112Right-handed alpha
Helix 9
AA9
A
113 128Right-handed alpha
Helix 10
AB1
A
138 149Right-handed alpha
Helix 11
AB2
A
156 158Right-handed 310
Helix 12
AB3
A
159 168Right-handed alpha
Helix 13
AB4
A
169 178Right-handed alpha
Helix 14
AB5
A
179 182Right-handed 310
Helix 15
AB6
B
2 2Right-handed 310
Helix 16
AB7
B
3 12Right-handed alpha
Helix 17
AB8
B
15 26Right-handed alpha
Helix 18
AB9
B
27 29Right-handed 310
Helix 19
AC1
B
40 51Right-handed alpha
Helix 20
AC2
B
59 69Right-handed alpha
Helix 21
AC3
B
71 76Right-handed alpha
Helix 22
AC4
B
84 90Right-handed alpha
Helix 23
AC5
B
99 111Right-handed alpha
Helix 24
AC6
B
113 128Right-handed alpha
Helix 25
AC7
B
138 149Right-handed alpha
Helix 26
AC8
B
156 159Right-handed 310
Helix 27
AC9
B
160 165Right-handed alpha
Helix 28
AD1
B
168 170Right-handed 310
Helix 29
AD2
B
171 176Right-handed alpha
Helix 30
AD3
B
177 182Right-handed 310
Helix 31
AD4
C
3 6Right-handed 310
Helix 32
AD5
C
7 12Right-handed alpha
Helix 33
AD6
C
15 27Right-handed alpha
Helix 34
AD7
C
40 51Right-handed alpha
Helix 35
AD8
C
59 69Right-handed alpha
Helix 36
AD9
C
71 73Right-handed 310
Helix 37
AE1
C
74 79Right-handed alpha
Helix 38
AE2
C
83 91Right-handed alpha
Helix 39
AE3
C
99 112Right-handed alpha
Helix 40
AE4
C
115 128Right-handed alpha
Helix 41
AE5
C
138 149Right-handed alpha
Helix 42
AE6
C
156 165Right-handed alpha
Helix 43
AE7
C
168 170Right-handed 310
Helix 44
AE8
C
171 176Right-handed alpha
Helix 45
AE9
C
177 182Right-handed 310
Helix 46
AF1
D
3 7Right-handed alpha
Helix 47
AF2
D
8 14Right-handed 310
Helix 48
AF3
D
15 26Right-handed alpha
Helix 49
AF4
D
27 29Right-handed 310
Helix 50
AF5
D
31 36Right-handed alpha
Helix 51
AF6
D
40 51Right-handed alpha
Helix 52
AF7
D
59 69Right-handed alpha
Helix 53
AF8
D
71 78Right-handed alpha
Helix 54
AF9
D
82 91Right-handed 310
Helix 55
AG1
D
99 112Right-handed alpha
Helix 56
AG2
D
113 128Right-handed alpha
Helix 57
AG3
D
138 149Right-handed alpha
Helix 58
AG4
D
156 166Right-handed alpha
Helix 59
AG5
D
168 177Right-handed alpha
Helix 60
AG6
D
178 182Right-handed 310
Helix 61
AG7
E
2 2Right-handed 310
Helix 62
AG8
E
3 12Right-handed alpha
Helix 63
AG9
E
15 27Right-handed alpha
Helix 64
AH1
E
40 51Right-handed alpha
Helix 65
AH2
E
59 69Right-handed alpha
Helix 66
AH3
E
71 78Right-handed alpha
Helix 67
AH4
E
83 90Right-handed alpha
Helix 68
AH5
E
99 112Right-handed alpha
Helix 69
AH6
E
113 128Right-handed alpha
Helix 70
AH7
E
138 149Right-handed alpha
Helix 71
AH8
E
156 166Right-handed alpha
Helix 72
AH9
E
168 177Right-handed alpha
Helix 73
AI1
E
178 182Right-handed 310
Helix 74
AI2
F
2 2Right-handed 310
Helix 75
AI3
F
3 12Right-handed alpha
Helix 76
AI4
F
15 26Right-handed alpha
Helix 77
AI5
F
27 29Right-handed 310
Helix 78
AI6
F
40 51Right-handed alpha
Helix 79
AI7
F
59 69Right-handed alpha
Helix 80
AI8
F
71 76Right-handed alpha
Helix 81
AI9
F
82 88Right-handed alpha
Helix 82
AJ1
F
89 92Right-handed 310
Helix 83
AJ2
F
99 112Right-handed alpha
Helix 84
AJ3
F
113 128Right-handed alpha
Helix 85
AJ4
F
138 149Right-handed alpha
Helix 86
AJ5
F
156 166Right-handed alpha
Helix 87
AJ6
F
167 170Right-handed 310
Helix 88
AJ7
F
171 176Right-handed alpha
Helix 89
AJ8
F
177 182Right-handed 310
Helix 90
AJ9
G
2 2Right-handed 310
Helix 91
AK1
G
3 8Right-handed alpha
Helix 92
AK2
G
9 13Right-handed 310
Helix 93
AK3
G
15 26Right-handed alpha
Helix 94
AK4
G
27 29Right-handed 310
Helix 95
AK5
G
31 36Right-handed alpha
Helix 96
AK6
G
40 51Right-handed alpha
Helix 97
AK7
G
59 69Right-handed alpha
Helix 98
AK8
G
71 78Right-handed alpha
Helix 99
AK9
G
82 90Right-handed alpha
Helix 100
AL1
G
99 112Right-handed alpha
Helix 101
AL2
G
113 128Right-handed alpha
Helix 102
AL3
G
138 148Right-handed alpha
Helix 103
AL4
G
153 157Right-handed 310
Helix 104
AL5
G
158 159Right-handed 310
Helix 105
AL6
G
160 165Right-handed alpha
Helix 106
AL7
G
168 176Right-handed alpha
Helix 107
AL8
G
177 182Right-handed 310
Helix 108
AL9
H
3 14Right-handed alpha
Helix 109
AM1
H
15 26Right-handed alpha
Helix 110
AM2
H
27 29Right-handed 310
Helix 111
AM3
H
31 36Right-handed alpha
Helix 112
AM4
H
40 51Right-handed alpha
Helix 113
AM5
H
59 69Right-handed alpha
Helix 114
AM6
H
71 78Right-handed alpha
Helix 115
AM7
H
82 91Right-handed 310
Helix 116
AM8
H
99 112Right-handed alpha
Helix 117
AM9
H
113 128Right-handed alpha
Helix 118
AN1
H
138 149Right-handed alpha
Helix 119
AN2
H
156 159Right-handed 310
Helix 120
AN3
H
160 165Right-handed alpha
Helix 121
AN4
H
168 176Right-handed alpha
Helix 122
AN5
H
177 182Right-handed 310
Helix 123
AN6
I
2 8Right-handed 310
Helix 124
AN7
I
9 14Right-handed alpha
Helix 125
AN8
I
15 26Right-handed alpha
Helix 126
AN9
I
27 29Right-handed 310
Helix 127
AO1
I
31 36Right-handed alpha
Helix 128
AO2
I
40 51Right-handed alpha
Helix 129
AO3
I
59 69Right-handed alpha
Helix 130
AO4
I
71 77Right-handed 310
Helix 131
AO5
I
82 91Right-handed 310
Helix 132
AO6
I
99 112Right-handed alpha
Helix 133
AO7
I
116 128Right-handed alpha
Helix 134
AO8
I
138 149Right-handed alpha
Helix 135
AO9
I
156 159Right-handed 310
Helix 136
AP1
I
160 165Right-handed alpha
Helix 137
AP2
I
168 176Right-handed alpha
Helix 138
AP3
I
177 182Right-handed 310
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There are no sheets in PDB entry 5L08
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