Analysis of interatomic Contacts of Structural Units in PDB entry:
5L73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5L73 entry

There are 2 chains in PDB entry 5L73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 640ALA 813
B
 GLU 642HIS 815
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5L73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
642 646Right-handed 310
Helix 2
AA2
A
698 702Right-handed 310
Helix 3
AA3
B
698 702Right-handed 310
Helix 4
AA4
B
805 810Right-handed alpha
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There are 6 sheets in PDB entry 5L73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
653 654first strand
Strand 2
A
657 658anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 665first strand
Strand 2
A
705 713anti-parallel
Strand 3
A
777 785anti-parallel
Strand 4
A
734 742anti-parallel
Strand 5
A
749 756anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
674 677first strand
Strand 2
A
691 696anti-parallel
Strand 3
A
792 800anti-parallel
Strand 4
A
720 728anti-parallel
Strand 5
A
764 770anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
653 654first strand
Strand 2
B
657 658anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
664 665first strand
Strand 2
B
705 709anti-parallel
Strand 3
B
777 785anti-parallel
Strand 4
B
734 742anti-parallel
Strand 5
B
748 756anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
674 677first strand
Strand 2
B
691 696anti-parallel
Strand 3
B
792 799anti-parallel
Strand 4
B
720 728anti-parallel
Strand 5
B
764 770anti-parallel
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