Analysis of interatomic Contacts of Structural Units in PDB entry:
5LLM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LLM entry

There is 1 chain in PDB entry 5LLM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 37ALA 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5LLM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 48Right-handed alpha
Helix 2
AA2
A
48 69Right-handed alpha
Helix 3
AA3
A
74 82Right-handed alpha
Helix 4
AA4
A
82 110Right-handed alpha
Helix 5
AA5
A
112 145Right-handed alpha
Helix 6
AA6
A
172 184Right-handed alpha
Helix 7
AA7
A
187 192Right-handed alpha
Helix 8
AA8
A
222 238Right-handed alpha
Helix 9
AA9
A
241 267Right-handed alpha
Helix 10
AB1
A
268 279Right-handed alpha
Helix 11
AB2
A
294 311Right-handed alpha
Helix 12
AB3
A
311 322Right-handed alpha
Helix 13
AB4
A
324 332Right-handed alpha
Helix 14
AB5
A
332 343Right-handed alpha
Helix 15
AB6
A
348 358Right-handed alpha
Helix 16
AB7
A
363 377Right-handed alpha
Helix 17
AB8
A
379 393Right-handed alpha
Helix 18
AB9
A
406 420Right-handed alpha
Helix 19
AC1
A
425 439Right-handed alpha
Helix 20
AC2
A
441 444Right-handed 310
Helix 21
AC3
A
445 478Right-handed alpha
Helix 22
AC4
A
478 486Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5LLM.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
217 219anti-parallel
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