Analysis of interatomic Contacts of Structural Units in PDB entry:
5LQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5LQ0 entry

There are 4 chains in PDB entry 5LQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 23ALA 23
A
 GLY 25ASP 339
B
 PRO 21ALA 23
B
 GLY 25ASP 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5LQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 48Right-handed alpha
Helix 2
AA2
A
52 61Right-handed alpha
Helix 3
AA3
A
64 80Right-handed alpha
Helix 4
AA4
A
82 91Right-handed alpha
Helix 5
AA5
A
92 104Right-handed alpha
Helix 6
AA6
A
105 118Right-handed alpha
Helix 7
AA7
A
119 123Right-handed 310
Helix 8
AA8
A
124 135Right-handed alpha
Helix 9
AA9
A
136 152Right-handed alpha
Helix 10
AB1
A
154 163Right-handed alpha
Helix 11
AB2
A
164 176Right-handed alpha
Helix 12
AB3
A
187 201Right-handed alpha
Helix 13
AB4
A
209 220Right-handed alpha
Helix 14
AB5
A
221 236Right-handed alpha
Helix 15
AB6
A
239 248Right-handed alpha
Helix 16
AB7
A
250 265Right-handed alpha
Helix 17
AB8
A
265 277Right-handed alpha
Helix 18
AB9
A
284 295Right-handed alpha
Helix 19
AC1
A
299 312Right-handed alpha
Helix 20
AC2
A
314 323Right-handed alpha
Helix 21
AC3
A
324 336Right-handed alpha
Helix 22
AC4
B
34 48Right-handed alpha
Helix 23
AC5
B
52 61Right-handed alpha
Helix 24
AC6
B
64 80Right-handed alpha
Helix 25
AC7
B
82 91Right-handed alpha
Helix 26
AC8
B
92 104Right-handed alpha
Helix 27
AC9
B
105 118Right-handed alpha
Helix 28
AD1
B
125 135Right-handed alpha
Helix 29
AD2
B
136 152Right-handed alpha
Helix 30
AD3
B
154 162Right-handed alpha
Helix 31
AD4
B
164 176Right-handed alpha
Helix 32
AD5
B
187 201Right-handed alpha
Helix 33
AD6
B
209 220Right-handed alpha
Helix 34
AD7
B
221 236Right-handed alpha
Helix 35
AD8
B
239 248Right-handed alpha
Helix 36
AD9
B
249 277Right-handed alpha
Helix 37
AE1
B
284 295Right-handed alpha
Helix 38
AE2
B
299 312Right-handed alpha
Helix 39
AE3
B
314 323Right-handed alpha
Helix 40
AE4
B
324 336Right-handed alpha
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There are no sheets in PDB entry 5LQ0
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