Analysis of interatomic Contacts of Structural Units in PDB entry:
5Q11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Q11 entry

There are 2 chains in PDB entry 5Q11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 247TRP 473
B
ASP 745ASP 756
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5Q11. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
250 266Right-handed alpha
Helix 2
AA2
A
270 280Right-handed alpha
Helix 3
AA3
A
283 308Right-handed alpha
Helix 4
AA4
A
311 315Right-handed 310
Helix 5
AA5
A
316 342Right-handed alpha
Helix 6
AA6
A
345 358Right-handed alpha
Helix 7
AA7
A
362 379Right-handed alpha
Helix 8
AA8
A
382 395Right-handed alpha
Helix 9
AA9
A
404 427Right-handed alpha
Helix 10
AB1
A
432 457Right-handed alpha
Helix 11
AB2
A
466 473Right-handed alpha
Helix 12
AB3
B
746 755Right-handed alpha
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There are no sheets in PDB entry 5Q11

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