Analysis of interatomic Contacts of Structural Units in PDB entry:
5SV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SV9 entry

There are 2 chains in PDB entry 5SV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 24TYR 499
B
 ILE 24TYR 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 5SV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 36Right-handed alpha
Helix 2
AA2
A
37 43Right-handed alpha
Helix 3
AA3
A
46 73Right-handed alpha
Helix 4
AA4
A
78 97Right-handed alpha
Helix 5
AA5
A
107 122Right-handed alpha
Helix 6
AA6
A
127 149Right-handed alpha
Helix 7
AA7
A
151 158Right-handed 310
Helix 8
AA8
A
161 188Right-handed alpha
Helix 9
AA9
A
198 221Right-handed alpha
Helix 10
AB1
A
225 233Right-handed alpha
Helix 11
AB2
A
235 250Right-handed alpha
Helix 12
AB3
A
288 294Right-handed alpha
Helix 13
AB4
A
295 319Right-handed alpha
Helix 14
AB5
A
329 348Right-handed alpha
Helix 15
AB6
A
357 366Right-handed alpha
Helix 16
AB7
A
382 391Right-handed alpha
Helix 17
AB8
A
396 407Right-handed alpha
Helix 18
AB9
A
408 422Right-handed alpha
Helix 19
AC1
A
427 438Right-handed alpha
Helix 20
AC2
A
446 452Right-handed alpha
Helix 21
AC3
A
453 477Right-handed alpha
Helix 22
AC4
A
479 481Right-handed 310
Helix 23
AC5
A
482 494Right-handed alpha
Helix 24
AC6
A
495 497Right-handed 310
Helix 25
AC7
B
25 38Right-handed alpha
Helix 26
AC8
B
39 43Right-handed 310
Helix 27
AC9
B
44 45Right-handed 310
Helix 28
AD1
B
46 73Right-handed alpha
Helix 29
AD2
B
78 97Right-handed alpha
Helix 30
AD3
B
107 122Right-handed alpha
Helix 31
AD4
B
123 125Right-handed 310
Helix 32
AD5
B
127 149Right-handed alpha
Helix 33
AD6
B
150 158Right-handed 310
Helix 34
AD7
B
162 188Right-handed alpha
Helix 35
AD8
B
197 221Right-handed alpha
Helix 36
AD9
B
225 235Right-handed alpha
Helix 37
AE1
B
235 250Right-handed alpha
Helix 38
AE2
B
288 294Right-handed alpha
Helix 39
AE3
B
295 319Right-handed alpha
Helix 40
AE4
B
330 348Right-handed alpha
Helix 41
AE5
B
357 366Right-handed alpha
Helix 42
AE6
B
382 391Right-handed alpha
Helix 43
AE7
B
392 395Right-handed 310
Helix 44
AE8
B
400 407Right-handed alpha
Helix 45
AE9
B
408 422Right-handed alpha
Helix 46
AF1
B
427 438Right-handed alpha
Helix 47
AF2
B
446 453Right-handed alpha
Helix 48
AF3
B
453 478Right-handed alpha
Helix 49
AF4
B
479 481Right-handed 310
Helix 50
AF5
B
482 494Right-handed alpha
Helix 51
AF6
B
495 498Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5SV9.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
353 354anti-parallel
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