Analysis of interatomic Contacts of Structural Units in PDB entry:
5SZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SZK entry

There are 2 chains in PDB entry 5SZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 533HIS 680
B
MET 1MET 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5SZK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
537 571Right-handed alpha
Helix 2
AA2
A
583 632Right-handed alpha
Helix 3
AA3
A
639 678Right-handed alpha
Helix 4
AA4
B
20 31Right-handed alpha
Helix 5
AA5
B
67 69Right-handed 310
Helix 6
AA6
B
70 76Right-handed alpha
Helix 7
AA7
B
77 79Right-handed 310
Helix 8
AA8
B
92 98Right-handed alpha
Helix 9
AA9
B
98 110Right-handed alpha
Helix 10
AB1
B
132 141Right-handed alpha
Helix 11
AB2
B
157 172Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5SZK.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
43 52first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
7 15parallel
Strand 4
B
83 89parallel
Strand 5
B
115 121parallel
Strand 6
B
147 149parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il