Analysis of interatomic Contacts of Structural Units in PDB entry:
5TE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TE0 entry

There is 1 chain in PDB entry 5TE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 26LYS 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 5TE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 35Right-handed 310
Helix 2
AA2
A
80 98Right-handed alpha
Helix 3
AA3
A
134 140Right-handed alpha
Helix 4
AA4
A
147 168Right-handed alpha
Helix 5
AA5
A
178 180Right-handed 310
Helix 6
AA6
A
204 209Right-handed alpha
Helix 7
AA7
A
209 221Right-handed alpha
Helix 8
AA8
A
222 226Right-handed 310
Helix 9
AA9
A
227 232Right-handed alpha
Helix 10
AB1
A
241 258Right-handed alpha
Helix 11
AB2
A
265 272Right-handed alpha
Helix 12
AB3
A
283 294Right-handed alpha
Helix 13
AB4
A
303 316Right-handed alpha
Helix 14
AB5
A
339 345Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 5TE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
44 55anti-parallel
Strand 3
A
58 64anti-parallel
Strand 4
A
70 78anti-parallel
Strand 5
A
120 127anti-parallel
Strand 6
A
106 112anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
182 184anti-parallel
Strand 3
A
190 192anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
337 338parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il