Analysis of interatomic Contacts of Structural Units in PDB entry:
5TQC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5TQC entry

There are 2 chains in PDB entry 5TQC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4VAL 890
B
 MET 326TYR 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 5TQC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 23Right-handed alpha
Helix 2
AA2
A
26 43Right-handed alpha
Helix 3
AA3
A
46 56Right-handed alpha
Helix 4
AA4
A
61 80Right-handed alpha
Helix 5
AA5
A
84 97Right-handed alpha
Helix 6
AA6
A
103 121Right-handed alpha
Helix 7
AA7
A
122 126Right-handed 310
Helix 8
AA8
A
129 138Right-handed alpha
Helix 9
AA9
A
141 159Right-handed alpha
Helix 10
AB1
A
159 164Right-handed alpha
Helix 11
AB2
A
171 180Right-handed alpha
Helix 12
AB3
A
181 183Right-handed 310
Helix 13
AB4
A
187 199Right-handed alpha
Helix 14
AB5
A
200 202Right-handed 310
Helix 15
AB6
A
206 211Right-handed alpha
Helix 16
AB7
A
212 223Right-handed alpha
Helix 17
AB8
A
228 246Right-handed alpha
Helix 18
AB9
A
250 252Right-handed 310
Helix 19
AC1
A
253 266Right-handed alpha
Helix 20
AC2
A
269 284Right-handed alpha
Helix 21
AC3
A
288 293Right-handed alpha
Helix 22
AC4
A
296 307Right-handed alpha
Helix 23
AC5
A
311 319Right-handed alpha
Helix 24
AC6
A
374 391Right-handed alpha
Helix 25
AC7
A
394 406Right-handed alpha
Helix 26
AC8
A
410 424Right-handed alpha
Helix 27
AC9
A
428 433Right-handed alpha
Helix 28
AD1
A
435 447Right-handed alpha
Helix 29
AD2
A
451 465Right-handed alpha
Helix 30
AD3
A
465 472Right-handed alpha
Helix 31
AD4
A
477 490Right-handed alpha
Helix 32
AD5
A
493 512Right-handed alpha
Helix 33
AD6
A
513 517Right-handed 310
Helix 34
AD7
A
518 529Right-handed alpha
Helix 35
AD8
A
535 553Right-handed alpha
Helix 36
AD9
A
554 557Right-handed 310
Helix 37
AE1
A
558 576Right-handed alpha
Helix 38
AE2
A
582 598Right-handed alpha
Helix 39
AE3
A
599 603Right-handed 310
Helix 40
AE4
A
604 629Right-handed alpha
Helix 41
AE5
A
637 656Right-handed alpha
Helix 42
AE6
A
659 665Right-handed alpha
Helix 43
AE7
A
667 676Right-handed alpha
Helix 44
AE8
A
680 698Right-handed alpha
Helix 45
AE9
A
698 703Right-handed alpha
Helix 46
AF1
A
705 716Right-handed alpha
Helix 47
AF2
A
721 740Right-handed alpha
Helix 48
AF3
A
741 746Right-handed 310
Helix 49
AF4
A
747 760Right-handed alpha
Helix 50
AF5
A
764 782Right-handed alpha
Helix 51
AF6
A
782 787Right-handed alpha
Helix 52
AF7
A
789 801Right-handed alpha
Helix 53
AF8
A
807 824Right-handed alpha
Helix 54
AF9
A
825 831Right-handed alpha
Helix 55
AG1
A
831 841Right-handed alpha
Helix 56
AG2
A
846 865Right-handed alpha
Helix 57
AG3
A
866 874Right-handed alpha
Helix 58
AG4
A
877 888Right-handed alpha
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There are no sheets in PDB entry 5TQC
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il